EnhancerDB
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  3. vista4557[chr1:201500233-201500477]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista4557[chr1:201500233-201500477]
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Tissue distribution of vista4557
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Transcription factor that possibly regulate vista4557[chr1:201500233-201500477]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 201499824 201500279 MYC UCSC Txn Factor no Conserved 107856585
chr1 201499866 201500262 CTCF UCSC Txn Factor no Conserved 107856586
chr1 201500257 201500261 TEAD2 TRANSFAC yes 34502936
chr1 201500257 201500261 TEAD2 TRANSFAC yes 118431945
chr1 201500263 201500277 GLIS3 JASPAR yes 34502937
chr1 201500263 201500277 GLIS3 JASPAR yes 118431946
chr1 201500264 201500280 GLIS1 JASPAR yes 34502938
chr1 201500264 201500280 GLIS1 JASPAR yes 118431947
chr1 201500265 201500279 GLIS2 JASPAR yes 34502939
chr1 201500265 201500279 GLIS2 JASPAR yes 118431948
chr1 201500269 201500284 RUNX2 JASPAR yes 34502940
chr1 201500269 201500284 RUNX2 JASPAR yes 118431949
chr1 201500301 201500311 NFIA JASPAR yes 34502941
chr1 201500301 201500311 NFIA JASPAR yes 118431950
chr1 201500302 201500311 HIC2 JASPAR yes 34502942
chr1 201500302 201500311 HIC2 JASPAR yes 118431951
chr1 201500303 201500309 NFIC JASPAR yes 34502943
chr1 201500303 201500309 NFIC JASPAR yes 118431952
chr1 201500310 201500322 TAL1 JASPAR yes 34502944
chr1 201500310 201500322 TAL1 JASPAR yes 118431953
chr1 201500312 201500322 OLIG1 JASPAR yes 34502945
chr1 201500312 201500322 OLIG3 JASPAR yes 34502946
chr1 201500312 201500322 OLIG1 JASPAR yes 118431954
chr1 201500312 201500322 OLIG3 JASPAR yes 118431955
chr1 201500312 201500324 TAL1 JASPAR yes 34502947
chr1 201500312 201500324 TAL1 JASPAR yes 118431956
chr1 201500325 201500329 NFE TRANSFAC yes 34502948
chr1 201500325 201500329 NFE TRANSFAC yes 118431957
chr1 201500342 201500353 FOXH1 JASPAR yes 34502949
chr1 201500342 201500353 FOXH1 JASPAR yes 118431958
chr1 201500387 201500399 HES5 JASPAR yes 34502950
chr1 201500387 201500399 HES5 JASPAR yes 118431959
chr1 201500388 201500398 HEY1 JASPAR yes 34502951
chr1 201500388 201500398 HEY2 JASPAR yes 34502952
chr1 201500388 201500398 HEY1 JASPAR yes 118431960
chr1 201500388 201500398 HEY2 JASPAR yes 118431961
chr1 201500433 201500438 H4TF1 TRANSFAC yes 34502953
chr1 201500433 201500438 H4TF1 TRANSFAC yes 118431962
chr1 201500452 201500457 GATA2 JASPAR yes 34502954
chr1 201500452 201500457 GATA2 JASPAR yes 118431963
SNP sites on vista4557[chr1:201500233-201500477]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 201500385 rs17428998 A G no 854812
chr1 201500411 rs116070755 T C no 854813
chr1 201500423 rs531368627 C T no 854814
chr1 201500467 rs114115762 C T no 854815
Genes possibly regulated by vista4557[chr1:201500233-201500477]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 201434620 201438365 - PHLDA3 ENSG00000174307.5 201438365 0.73 1.0 1707 38132
chr1 201452658 201478584 - CSRP1 ENSG00000159176.9 201478584 0.86 0.99 1708 78351
chr1 201592013 201592738 + AC096677.1 ENSG00000269690.1 201592013 0.84 1.0 1709 8464
chr1 201592411 201796102 + NAV1 ENSG00000134369.11 201592411 0.79 1.0 1710 8066
Expression level of Genes
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miRNAs possibly regulated by vista4557[chr1:201500233-201500477]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results