EnhancerDB
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  3. rs17428998[chr1:201500385]
Enhancers that have rs17428998[chr1:201500385]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 201492445 201517481 enh12522
Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Lung (PC-9) Bone (Osteoblast) Stomach Muscle (A673) Placenta Colon (HCT116) Uterus Muscle (Myoblast) Pancreas Spleen Neural Stem Cells (H9) Heart
chr1 201500233 201500477 vista4557
VISTA
Transcript factors that have rs17428998[chr1:201500385]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 201499781 201501519 ZBTB33 GTRD no Lung (A549) 107856583
chr1 201499968 201501898 ZNF143 GTRD no Epithelial (MCF-7) 107856602
chr1 201500168 201501338 ZNF143 GTRD no Epithelial (MCF-7) 107856603
Genes associated with rs17428998[chr1:201500385], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More