EnhancerDB
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  3. vista46082[chr4:144280232-144280410]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista46082[chr4:144280232-144280410]
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Tissue distribution of vista46082
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Transcription factor that possibly regulate vista46082[chr4:144280232-144280410]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr4 144280077 144280285 FOXA1 UCSC Txn Factor no Conserved 108533579
chr4 144280094 144280292 GATA3 UCSC Txn Factor no Conserved 108533580
chr4 144280221 144280232 FOXB1 JASPAR yes 49289666
chr4 144280221 144280232 FOXB1 JASPAR yes 93342932
chr4 144280227 144280237 TBX21 JASPAR yes 49289667
chr4 144280227 144280237 TBX21 JASPAR yes 93342933
chr4 144280227 144280238 TBX20 JASPAR yes 49289668
chr4 144280227 144280238 TBX2 JASPAR yes 49289669
chr4 144280227 144280238 TBX20 JASPAR yes 93342934
chr4 144280227 144280238 TBX2 JASPAR yes 93342935
chr4 144280227 144280240 EOMES JASPAR yes 49289670
chr4 144280227 144280240 EOMES JASPAR yes 93342936
chr4 144280228 144280238 TBR1 JASPAR yes 49289671
chr4 144280228 144280238 TBR1 JASPAR yes 93342937
chr4 144280231 144280245 GATA2 JASPAR yes 49289672
chr4 144280231 144280245 GATA2 JASPAR yes 93342938
chr4 144280236 144280239 MYB TRANSFAC yes 49289673
chr4 144280236 144280239 MYB TRANSFAC yes 93342939
chr4 144280239 144280243 YY1 TRANSFAC yes 49289674
chr4 144280239 144280243 YY1 TRANSFAC yes 93342940
chr4 144280258 144280273 HNF1A JASPAR yes 49289675
chr4 144280258 144280273 HNF1A JASPAR yes 93342941
chr4 144280259 144280271 HNF1B JASPAR yes 49289676
chr4 144280259 144280271 HNF1B JASPAR yes 93342942
chr4 144280267 144280274 NKX3-1 JASPAR yes 49289677
chr4 144280267 144280274 NKX3-1 JASPAR yes 93342943
chr4 144280282 144280293 HOXC11 JASPAR yes 49289678
chr4 144280282 144280293 HOXC12 JASPAR yes 49289679
chr4 144280282 144280293 HOXC11 JASPAR yes 93342944
chr4 144280282 144280293 HOXC12 JASPAR yes 93342945
chr4 144280283 144280293 HOXC10 JASPAR yes 49289680
chr4 144280283 144280293 HOXD11 JASPAR yes 49289681
chr4 144280283 144280293 HOXC10 JASPAR yes 93342946
chr4 144280283 144280293 HOXD11 JASPAR yes 93342947
chr4 144280295 144280305 TFAP4 JASPAR yes 49289682
chr4 144280295 144280305 TFAP4 JASPAR yes 93342948
chr4 144280300 144280304 NFE TRANSFAC yes 49289683
chr4 144280300 144280304 NFE TRANSFAC yes 93342949
chr4 144280302 144280313 USF2 JASPAR yes 49289684
chr4 144280302 144280313 USF2 JASPAR yes 93342950
chr4 144280305 144280320 TFAP2A JASPAR yes 49289685
chr4 144280305 144280320 TFAP2C JASPAR yes 49289686
chr4 144280305 144280320 TFAP2A JASPAR yes 93342951
chr4 144280305 144280320 TFAP2C JASPAR yes 93342952
chr4 144280308 144280319 TFAP2A JASPAR yes 49289687
chr4 144280308 144280319 TFAP2A JASPAR yes 93342953
chr4 144280308 144280320 TFAP2A JASPAR yes 49289688
chr4 144280308 144280320 TFAP2B JASPAR yes 49289689
chr4 144280308 144280320 TFAP2C JASPAR yes 49289690
chr4 144280308 144280320 TFAP2A JASPAR yes 93342954
chr4 144280308 144280320 TFAP2B JASPAR yes 93342955
chr4 144280308 144280320 TFAP2C JASPAR yes 93342956
chr4 144280309 144280318 TFAP2A JASPAR yes 49289691
chr4 144280309 144280318 TFAP2A JASPAR yes 93342957
chr4 144280330 144280335 SP1 TRANSFAC yes 49289692
chr4 144280330 144280335 SP1 TRANSFAC yes 93342958
chr4 144280334 144280347 ELF3 JASPAR yes 49289693
chr4 144280334 144280347 ELF3 JASPAR yes 93342959
chr4 144280335 144280339 YY1 TRANSFAC yes 49289694
chr4 144280335 144280339 YY1 TRANSFAC yes 93342960
chr4 144280335 144280345 ELK3 JASPAR yes 49289695
chr4 144280335 144280345 ERF JASPAR yes 49289696
chr4 144280335 144280345 ERG JASPAR yes 49289697
chr4 144280335 144280345 ETS1 JASPAR yes 49289698
chr4 144280335 144280345 ETV3 JASPAR yes 49289699
chr4 144280335 144280345 ETV4 JASPAR yes 49289700
chr4 144280335 144280345 FEV JASPAR yes 49289701
chr4 144280335 144280345 FLI1 JASPAR yes 49289702
chr4 144280335 144280345 ELK3 JASPAR yes 93342961
chr4 144280335 144280345 ERF JASPAR yes 93342962
chr4 144280335 144280345 ERG JASPAR yes 93342963
chr4 144280335 144280345 ETS1 JASPAR yes 93342964
chr4 144280335 144280345 ETV3 JASPAR yes 93342965
chr4 144280335 144280345 ETV4 JASPAR yes 93342966
chr4 144280335 144280345 FEV JASPAR yes 93342967
chr4 144280335 144280345 FLI1 JASPAR yes 93342968
chr4 144280335 144280346 ELF5 JASPAR yes 49289703
chr4 144280335 144280346 ETV2 JASPAR yes 49289704
chr4 144280335 144280346 ELF5 JASPAR yes 93342969
chr4 144280335 144280346 ETV2 JASPAR yes 93342970
chr4 144280335 144280347 EHF JASPAR yes 49289705
chr4 144280335 144280347 ELF1 JASPAR yes 49289706
chr4 144280335 144280347 EHF JASPAR yes 93342971
chr4 144280335 144280347 ELF1 JASPAR yes 93342972
chr4 144280335 144280348 ELF1 JASPAR yes 49289707
chr4 144280335 144280348 ELF1 JASPAR yes 93342973
chr4 144280336 144280350 IRF7 JASPAR yes 49289708
chr4 144280336 144280350 IRF7 JASPAR yes 93342974
chr4 144280337 144280343 ETS1 JASPAR yes 49289709
chr4 144280337 144280343 ETS1 JASPAR yes 93342975
chr4 144280350 144280356 JUN TRANSFAC yes 49289710
chr4 144280350 144280356 JUN TRANSFAC yes 93342976
chr4 144280352 144280366 SPIC JASPAR yes 49289711
chr4 144280352 144280366 SPIC JASPAR yes 93342977
chr4 144280353 144280366 ELF1 JASPAR yes 49289712
chr4 144280353 144280366 ELF1 JASPAR yes 93342978
chr4 144280354 144280357 MYB TRANSFAC yes 49289713
chr4 144280354 144280357 MYB TRANSFAC yes 93342979
chr4 144280354 144280366 EHF JASPAR yes 49289714
chr4 144280354 144280366 ELF1 JASPAR yes 49289715
chr4 144280354 144280366 EHF JASPAR yes 93342980
chr4 144280354 144280366 ELF1 JASPAR yes 93342981
chr4 144280354 144280367 ELF3 JASPAR yes 49289716
chr4 144280354 144280367 ELF3 JASPAR yes 93342982
chr4 144280354 144280375 IRF1 JASPAR yes 49289717
chr4 144280354 144280375 IRF1 JASPAR yes 93342983
chr4 144280355 144280366 ELF5 JASPAR yes 49289718
chr4 144280355 144280366 ETV2 JASPAR yes 49289719
chr4 144280355 144280366 ELF5 JASPAR yes 93342984
chr4 144280355 144280366 ETV2 JASPAR yes 93342985
chr4 144280356 144280366 ERF JASPAR yes 49289720
chr4 144280356 144280366 ERG JASPAR yes 49289721
chr4 144280356 144280366 ETS1 JASPAR yes 49289722
chr4 144280356 144280366 FEV JASPAR yes 49289723
chr4 144280356 144280366 FLI1 JASPAR yes 49289724
chr4 144280356 144280366 ERF JASPAR yes 93342986
chr4 144280356 144280366 ERG JASPAR yes 93342987
chr4 144280356 144280366 ETS1 JASPAR yes 93342988
chr4 144280356 144280366 FEV JASPAR yes 93342989
chr4 144280356 144280366 FLI1 JASPAR yes 93342990
chr4 144280356 144280367 FLI1 JASPAR yes 49289725
chr4 144280356 144280367 FLI1 JASPAR yes 93342991
chr4 144280357 144280365 FEV JASPAR yes 49289726
chr4 144280357 144280365 FEV JASPAR yes 93342992
chr4 144280360 144280381 IRF1 JASPAR yes 49289727
chr4 144280360 144280381 IRF1 JASPAR yes 93342993
chr4 144280362 144280377 IRF9 JASPAR yes 49289728
chr4 144280362 144280377 IRF9 JASPAR yes 93342994
chr4 144280363 144280377 IRF8 JASPAR yes 49289729
chr4 144280363 144280377 IRF8 JASPAR yes 93342995
chr4 144280364 144280382 IRF2 JASPAR yes 49289730
chr4 144280364 144280382 IRF2 JASPAR yes 93342996
chr4 144280389 144280393 ESR1 TRANSFAC yes 49289731
chr4 144280389 144280393 ESR1 TRANSFAC yes 93342997
chr4 144280389 144280400 USF1 JASPAR yes 49289732
chr4 144280389 144280400 USF1 JASPAR yes 93342998
chr4 144280408 144280421 ZBTB18 JASPAR yes 49289733
chr4 144280408 144280421 ZBTB18 JASPAR yes 93342999
SNP sites on vista46082[chr4:144280232-144280410]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr4 144280286 rs574313547 C T
GATA3 HOXC10 HOXC11 HOXC12 HOXD11
7857368
chr4 144280296 rs139280294 C T
TFAP4
7857369
Genes possibly regulated by vista46082[chr4:144280232-144280410]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr4 144257915 144395721 + GAB1 ENSG00000109458.4 144257915 0.82 0.99 5033 77683
Expression level of Genes
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miRNAs possibly regulated by vista46082[chr4:144280232-144280410]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results