EnhancerDB
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  3. rs574313547[chr4:144280286]
Enhancers that have rs574313547[chr4:144280286]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr4 144260545 144286732 enh21839
Bone Marrow (K562) Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Neural Stem Cells (H9) Thymus Prostate (PC-3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Lung Muscle (A673) Heart
chr4 144280232 144280410 vista46082
VISTA
Transcript factors that have rs574313547[chr4:144280286]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr4 144280094 144280292 GATA3 UCSC Txn Factor no Conserved 108533580
chr4 144280282 144280293 HOXC11 JASPAR yes 49289678
chr4 144280282 144280293 HOXC12 JASPAR yes 49289679
chr4 144280282 144280293 HOXC11 JASPAR yes 93342944
chr4 144280282 144280293 HOXC12 JASPAR yes 93342945
chr4 144280283 144280293 HOXC10 JASPAR yes 49289680
chr4 144280283 144280293 HOXD11 JASPAR yes 49289681
chr4 144280283 144280293 HOXC10 JASPAR yes 93342946
chr4 144280283 144280293 HOXD11 JASPAR yes 93342947
Genes associated with rs574313547[chr4:144280286], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More