EnhancerDB
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  3. vista463[chr1:15416988-15417263]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista463[chr1:15416988-15417263]
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Tissue distribution of vista463
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Transcription factor that possibly regulate vista463[chr1:15416988-15417263]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 15417015 15417032 RXRA JASPAR yes 26961429
chr1 15417015 15417032 RXRA JASPAR yes 118235576
chr1 15417022 15417030 MEIS3 JASPAR yes 26961430
chr1 15417022 15417030 MEIS3 JASPAR yes 118235577
chr1 15417023 15417027 NFE TRANSFAC yes 26961431
chr1 15417023 15417027 NFE TRANSFAC yes 118235578
chr1 15417024 15417035 USF1 JASPAR yes 26961432
chr1 15417024 15417035 USF2 JASPAR yes 26961433
chr1 15417024 15417035 USF1 JASPAR yes 118235579
chr1 15417024 15417035 USF2 JASPAR yes 118235580
chr1 15417024 15417036 PKNOX1 JASPAR yes 26961434
chr1 15417024 15417036 PKNOX2 JASPAR yes 26961435
chr1 15417024 15417036 TGIF1 JASPAR yes 26961436
chr1 15417024 15417036 TGIF2 JASPAR yes 26961437
chr1 15417024 15417036 PKNOX1 JASPAR yes 118235581
chr1 15417024 15417036 PKNOX2 JASPAR yes 118235582
chr1 15417024 15417036 TGIF1 JASPAR yes 118235583
chr1 15417024 15417036 TGIF2 JASPAR yes 118235584
chr1 15417025 15417032 USF2 TRANSFAC yes 26961438
chr1 15417025 15417032 USF2 TRANSFAC yes 118235585
chr1 15417027 15417032 USF2 TRANSFAC yes 26961439
chr1 15417027 15417032 USF2 TRANSFAC yes 118235586
chr1 15417033 15417044 FLI1 JASPAR yes 26961440
chr1 15417033 15417044 FLI1 JASPAR yes 118235587
chr1 15417034 15417042 EHF JASPAR yes 26961441
chr1 15417034 15417042 EHF JASPAR yes 118235588
chr1 15417040 15417045 SP1 TRANSFAC yes 26961442
chr1 15417040 15417045 SP1 TRANSFAC yes 118235589
chr1 15417043 15417048 SP1 TRANSFAC yes 26961443
chr1 15417043 15417048 SP1 TRANSFAC yes 118235590
chr1 15417043 15417057 PLAG1 JASPAR yes 26961444
chr1 15417043 15417057 PLAG1 JASPAR yes 118235591
chr1 15417051 15417056 SP1 TRANSFAC yes 26961445
chr1 15417051 15417056 SP1 TRANSFAC yes 118235592
chr1 15417051 15417057 SP1 TRANSFAC yes 26961446
chr1 15417051 15417057 SP1 TRANSFAC yes 118235593
chr1 15417064 15417076 NHLH1 JASPAR yes 26961447
chr1 15417064 15417076 NHLH1 JASPAR yes 118235594
chr1 15417065 15417075 NHLH1 JASPAR yes 26961448
chr1 15417065 15417075 NHLH1 JASPAR yes 118235595
chr1 15417079 15417085 ETS1 JASPAR yes 26961449
chr1 15417079 15417085 ETS1 JASPAR yes 118235596
chr1 15417083 15417093 TEAD1 JASPAR yes 26961450
chr1 15417083 15417093 TEAD4 JASPAR yes 26961451
chr1 15417083 15417093 TEAD1 JASPAR yes 118235597
chr1 15417083 15417093 TEAD4 JASPAR yes 118235598
chr1 15417083 15417095 TEAD1 JASPAR yes 26961452
chr1 15417083 15417095 TEAD1 JASPAR yes 118235599
chr1 15417084 15417092 TEAD3 JASPAR yes 26961453
chr1 15417084 15417092 TEAD3 JASPAR yes 118235600
chr1 15417086 15417097 STAT1 JASPAR yes 26961454
chr1 15417086 15417097 STAT3 JASPAR yes 26961455
chr1 15417086 15417097 STAT1 JASPAR yes 118235601
chr1 15417086 15417097 STAT3 JASPAR yes 118235602
chr1 15417090 15417104 TLX1 JASPAR yes 26961456
chr1 15417090 15417104 TLX1 JASPAR yes 118235603
chr1 15417091 15417105 TLX1 JASPAR yes 26961457
chr1 15417091 15417105 TLX1 JASPAR yes 118235604
chr1 15417091 15417107 RFX2 JASPAR yes 26961458
chr1 15417091 15417107 RFX3 JASPAR yes 26961459
chr1 15417091 15417107 RFX4 JASPAR yes 26961460
chr1 15417091 15417107 RFX5 JASPAR yes 26961461
chr1 15417091 15417107 RFX2 JASPAR yes 118235605
chr1 15417091 15417107 RFX3 JASPAR yes 118235606
chr1 15417091 15417107 RFX4 JASPAR yes 118235607
chr1 15417091 15417107 RFX5 JASPAR yes 118235608
chr1 15417092 15417111 RFX2 JASPAR yes 26961462
chr1 15417092 15417111 RFX2 JASPAR yes 118235609
chr1 15417094 15417109 RFX5 JASPAR yes 26961463
chr1 15417094 15417109 RFX5 JASPAR yes 118235610
chr1 15417099 15417112 SCRT2 JASPAR yes 26961464
chr1 15417099 15417112 SCRT2 JASPAR yes 118235611
chr1 15417099 15417114 ZIC4 JASPAR yes 26961465
chr1 15417099 15417114 ZIC4 JASPAR yes 118235612
chr1 15417100 15417114 ZIC1 JASPAR yes 26961466
chr1 15417100 15417114 ZIC1 JASPAR yes 118235613
chr1 15417146 15417161 NR2C2 JASPAR yes 26961467
chr1 15417146 15417161 NR2C2 JASPAR yes 118235614
chr1 15417156 15417160 YY1 TRANSFAC yes 26961468
chr1 15417156 15417160 YY1 TRANSFAC yes 118235615
chr1 15417157 15417165 FEV JASPAR yes 26961469
chr1 15417157 15417165 FEV JASPAR yes 118235616
chr1 15417157 15417171 EBF1 JASPAR yes 26961470
chr1 15417157 15417171 EBF1 JASPAR yes 118235617
chr1 15417159 15417164 ETS2 TRANSFAC yes 26961471
chr1 15417159 15417164 ETS2 TRANSFAC yes 118235618
chr1 15417163 15417178 FOXP1 JASPAR yes 26961472
chr1 15417163 15417178 FOXP1 JASPAR yes 118235619
chr1 15417172 15417178 SOX10 JASPAR yes 26961473
chr1 15417172 15417178 SOX10 JASPAR yes 118235620
chr1 15417213 15417219 NFIC JASPAR yes 26961474
chr1 15417213 15417219 NFIC JASPAR yes 118235621
chr1 15417219 15417227 NR4A2 JASPAR yes 26961475
chr1 15417219 15417227 NR4A2 JASPAR yes 118235622
chr1 15417220 15417234 RXRB JASPAR yes 26961476
chr1 15417220 15417234 RXRG JASPAR yes 26961477
chr1 15417220 15417234 RXRB JASPAR yes 118235623
chr1 15417220 15417234 RXRG JASPAR yes 118235624
chr1 15417220 15417235 NR2C2 JASPAR yes 26961478
chr1 15417220 15417235 NR2C2 JASPAR yes 118235625
chr1 15417235 15417253 TP63 JASPAR yes 26961479
chr1 15417235 15417253 TP73 JASPAR yes 26961480
chr1 15417235 15417253 TP63 JASPAR yes 118235626
chr1 15417235 15417253 TP73 JASPAR yes 118235627
chr1 15417236 15417251 TP53 JASPAR yes 26961481
chr1 15417236 15417251 TP53 JASPAR yes 118235628
SNP sites on vista463[chr1:15416988-15417263]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 15417068 rs34853912 C A
NHLH1
101777
chr1 15417079 rs560945282 G A
ETS1
101778
chr1 15417123 rs116456725 G A no 101779
chr1 15417139 rs532098531 G T no 101780
chr1 15417204 rs117475707 C T no 101781
chr1 15417231 rs549902084 AC A
NR2C2 RXRB RXRG
101782
chr1 15417246 rs12564054 A T
TP53 TP63 TP73
101783
chr1 15417260 rs74059823 G A no 101784
Genes possibly regulated by vista463[chr1:15416988-15417263]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 15479028 15546976 + TMEM51 ENSG00000171729.9 15479028 0.79 1.0 202 38235
chr1 15490840 15497813 - C1orf195 ENSG00000204464.3 15497813 0.87 1.0 203 19450
Expression level of Genes
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miRNAs possibly regulated by vista463[chr1:15416988-15417263]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results