EnhancerDB
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  3. rs549902084[chr1:15417231]
Enhancers that have rs549902084[chr1:15417231]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 15411485 15419175 enh75
Kidney Large Intestine Ovary Esophagus Lung (PC-9) Stomach Placenta Colon (HCT116) Breast Thyroid Blood (Karpas-422) Peripheral Blood (MM.1S) Pancreas Uterus Epithelial (MCF-7)
chr1 15416988 15417263 vista463
VISTA
Transcript factors that have rs549902084[chr1:15417231]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 15414124 15418050 ZNF274 GTRD no Blood (GM12878) 107802164
chr1 15414124 15418050 ZNF274 GTRD no Blood (GM12878) 107802165
chr1 15417220 15417234 RXRB JASPAR yes 26961476
chr1 15417220 15417234 RXRG JASPAR yes 26961477
chr1 15417220 15417234 RXRB JASPAR yes 118235623
chr1 15417220 15417234 RXRG JASPAR yes 118235624
chr1 15417220 15417235 NR2C2 JASPAR yes 26961478
chr1 15417220 15417235 NR2C2 JASPAR yes 118235625
Genes associated with rs549902084[chr1:15417231], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More