EnhancerDB
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  3. vista465[chr1:15519488-15519688]
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista465[chr1:15519488-15519688]
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Tissue distribution of vista465
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Transcription factor that possibly regulate vista465[chr1:15519488-15519688]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 15519499 15519503 H4TF2 TRANSFAC yes 26969225
chr1 15519499 15519503 H4TF2 TRANSFAC yes 118235701
chr1 15519523 15519538 RFX5 JASPAR yes 26969226
chr1 15519523 15519538 RFX5 JASPAR yes 118235702
chr1 15519524 15519539 TFAP2A JASPAR yes 26969227
chr1 15519524 15519539 TFAP2A JASPAR yes 118235703
chr1 15519527 15519539 TFAP2A JASPAR yes 26969228
chr1 15519527 15519539 TFAP2B JASPAR yes 26969229
chr1 15519527 15519539 TFAP2C JASPAR yes 26969230
chr1 15519527 15519539 TFAP2A JASPAR yes 118235704
chr1 15519527 15519539 TFAP2B JASPAR yes 118235705
chr1 15519527 15519539 TFAP2C JASPAR yes 118235706
chr1 15519527 15519542 TFAP2A JASPAR yes 26969231
chr1 15519527 15519542 TFAP2A JASPAR yes 118235707
chr1 15519529 15519538 TFAP2A JASPAR yes 26969232
chr1 15519529 15519538 TFAP2A JASPAR yes 118235708
chr1 15519534 15519538 LFA1 TRANSFAC yes 26969233
chr1 15519534 15519538 LFA1 TRANSFAC yes 118235709
chr1 15519541 15519555 MTF1 JASPAR yes 26969234
chr1 15519541 15519555 MTF1 JASPAR yes 118235710
chr1 15519542 15519547 SP1 TRANSFAC yes 26969235
chr1 15519542 15519547 SP1 TRANSFAC yes 118235711
chr1 15519543 15519548 SP1 TRANSFAC yes 26969236
chr1 15519543 15519548 SP1 TRANSFAC yes 118235712
chr1 15519601 15519620 REST JASPAR yes 26969237
chr1 15519601 15519620 REST JASPAR yes 118235713
chr1 15519605 15519624 CTCF JASPAR yes 26969238
chr1 15519605 15519624 CTCF JASPAR yes 118235714
chr1 15519609 15519623 PLAG1 JASPAR yes 26969239
chr1 15519609 15519623 PLAG1 JASPAR yes 118235715
chr1 15519616 15519630 PLAG1 JASPAR yes 26969240
chr1 15519616 15519630 PLAG1 JASPAR yes 118235716
chr1 15519621 15519632 EBF1 JASPAR yes 26969241
chr1 15519621 15519632 EBF1 JASPAR yes 118235717
chr1 15519625 15519630 TFAP2A TRANSFAC yes 26969242
chr1 15519625 15519630 TFAP2A TRANSFAC yes 118235718
chr1 15519625 15519631 MZF1 JASPAR yes 26969243
chr1 15519625 15519631 MZF1 JASPAR yes 118235719
chr1 15519628 15519634 PEA3 TRANSFAC yes 26969244
chr1 15519628 15519634 PEA3 TRANSFAC yes 118235720
chr1 15519641 15519656 RUNX2 JASPAR yes 26969245
chr1 15519641 15519656 RUNX2 JASPAR yes 118235721
chr1 15519648 15519663 AR JASPAR yes 26969246
chr1 15519648 15519663 AR JASPAR yes 118235722
chr1 15519660 15519679 CTCF JASPAR yes 26969247
chr1 15519660 15519679 CTCF JASPAR yes 118235723
chr1 15519661 15519669 MEIS2 JASPAR yes 26969248
chr1 15519661 15519669 MEIS3 JASPAR yes 26969249
chr1 15519661 15519669 MEIS2 JASPAR yes 118235724
chr1 15519661 15519669 MEIS3 JASPAR yes 118235725
chr1 15519662 15519666 NFE TRANSFAC yes 26969250
chr1 15519662 15519666 NFE TRANSFAC yes 118235726
SNP sites on vista465[chr1:15519488-15519688]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 15519540 rs532656660 T C
TFAP2A
102974
chr1 15519583 rs742670 G A no 102975
chr1 15519598 rs742669 C T no 102976
chr1 15519612 rs113243751 G A
CTCF PLAG1 REST
102977
chr1 15519627 rs77053126 G C
EBF1 MZF1 PLAG1 TFAP2A
102978
chr1 15519662 rs375928029 G A
AR CTCF MEIS2 MEIS3 NFE
102979
chr1 15519682 rs742668 G A no 102980
Genes possibly regulated by vista465[chr1:15519488-15519688]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 15479028 15546976 + TMEM51 ENSG00000171729.9 15479028 0.79 1.0 202 59540
chr1 15490840 15497813 - C1orf195 ENSG00000204464.3 15497813 0.87 1.0 203 78325
chr1 15573768 15726779 + FHAD1 ENSG00000142621.15 15573768 0.93 1.0 204 45920
Expression level of Genes
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miRNAs possibly regulated by vista465[chr1:15519488-15519688]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results