EnhancerDB
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  3. rs375928029[chr1:15519662]
Enhancers that have rs375928029[chr1:15519662]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 15498831 15536635 enh11531
Astrocyte Colon (HCT116) Adrenal Embryonic Stem Cell Line (H1-hESC) Pancreas Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Liver (HepG2) Prostate (RWPE1) Lung Heart
chr1 15519488 15519688 vista465
VISTA
Transcript factors that have rs375928029[chr1:15519662]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 15519281 15520053 ZNF274 GTRD no Bone Marrow (K562) 107802167
chr1 15519648 15519663 AR JASPAR yes 26969246
chr1 15519648 15519663 AR JASPAR yes 118235722
chr1 15519660 15519679 CTCF JASPAR yes 26969247
chr1 15519660 15519679 CTCF JASPAR yes 118235723
chr1 15519661 15519669 MEIS2 JASPAR yes 26969248
chr1 15519661 15519669 MEIS3 JASPAR yes 26969249
chr1 15519661 15519669 MEIS2 JASPAR yes 118235724
chr1 15519661 15519669 MEIS3 JASPAR yes 118235725
chr1 15519662 15519666 NFE TRANSFAC yes 26969250
chr1 15519662 15519666 NFE TRANSFAC yes 118235726
Genes associated with rs375928029[chr1:15519662], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More