EnhancerDB
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  3. vista4688[chr1:204388302-204388627]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista4688[chr1:204388302-204388627]
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Tissue distribution of vista4688
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Transcription factor that possibly regulate vista4688[chr1:204388302-204388627]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 204388300 204388318 NR3C1 JASPAR yes 34700782
chr1 204388300 204388318 NR3C1 JASPAR yes 118438216
chr1 204388316 204388335 RFX2 JASPAR yes 34700783
chr1 204388316 204388335 RFX2 JASPAR yes 118438217
chr1 204388318 204388333 RFX5 JASPAR yes 34700784
chr1 204388318 204388333 RFX5 JASPAR yes 118438218
chr1 204388320 204388336 RFX4 JASPAR yes 34700785
chr1 204388320 204388336 RFX5 JASPAR yes 34700786
chr1 204388320 204388336 RFX4 JASPAR yes 118438219
chr1 204388320 204388336 RFX5 JASPAR yes 118438220
chr1 204388333 204388342 SOX9 JASPAR yes 34700787
chr1 204388333 204388342 SOX9 JASPAR yes 118438221
chr1 204388336 204388357 ZNF263 JASPAR yes 34700788
chr1 204388336 204388357 ZNF263 JASPAR yes 118438222
chr1 204388344 204388354 SP1 JASPAR yes 34700789
chr1 204388344 204388354 SP1 JASPAR yes 118438223
chr1 204388347 204388357 SP1 JASPAR yes 34700790
chr1 204388347 204388357 SP1 JASPAR yes 118438224
chr1 204388374 204388380 ZNF354C JASPAR yes 34700791
chr1 204388374 204388380 ZNF354C JASPAR yes 118438225
chr1 204388376 204388387 GCM1 JASPAR yes 34700792
chr1 204388376 204388387 GCM1 JASPAR yes 118438226
chr1 204388377 204388387 GCM2 JASPAR yes 34700793
chr1 204388377 204388387 GCM2 JASPAR yes 118438227
chr1 204388393 204388396 MYB TRANSFAC yes 34700794
chr1 204388393 204388396 MYB TRANSFAC yes 118438228
chr1 204388397 204388412 JUND JASPAR yes 34700795
chr1 204388397 204388412 JUND JASPAR yes 118438229
chr1 204388398 204388411 JUN JASPAR yes 34700796
chr1 204388398 204388411 JUN JASPAR yes 118438230
chr1 204388400 204388415 JUND JASPAR yes 34700797
chr1 204388400 204388415 JUND JASPAR yes 118438231
chr1 204388431 204388437 YY1 JASPAR yes 34700798
chr1 204388431 204388437 YY1 JASPAR yes 118438232
chr1 204388476 204388490 EBF1 JASPAR yes 34700799
chr1 204388476 204388490 EBF1 JASPAR yes 118438233
chr1 204388478 204388489 EBF1 JASPAR yes 34700800
chr1 204388478 204388489 EBF1 JASPAR yes 118438234
chr1 204388505 204388509 YY1 TRANSFAC yes 34700801
chr1 204388505 204388509 YY1 TRANSFAC yes 118438235
chr1 204388505 204388516 CEBPB JASPAR yes 34700802
chr1 204388505 204388516 CEBPB JASPAR yes 118438236
chr1 204388511 204388520 NKX3-2 JASPAR yes 34700803
chr1 204388511 204388520 NKX3-2 JASPAR yes 118438237
chr1 204388519 204388524 H4TF1 TRANSFAC yes 34700804
chr1 204388519 204388524 H4TF1 TRANSFAC yes 118438238
chr1 204388523 204388536 EOMES JASPAR yes 34700805
chr1 204388523 204388536 EOMES JASPAR yes 118438239
chr1 204388524 204388528 NFE TRANSFAC yes 34700806
chr1 204388524 204388528 NFE TRANSFAC yes 118438240
chr1 204388525 204388535 TBR1 JASPAR yes 34700807
chr1 204388525 204388535 TBR1 JASPAR yes 118438241
chr1 204388525 204388536 TBX20 JASPAR yes 34700808
chr1 204388525 204388536 TBX2 JASPAR yes 34700809
chr1 204388525 204388536 TBX20 JASPAR yes 118438242
chr1 204388525 204388536 TBX2 JASPAR yes 118438243
chr1 204388526 204388536 TBX21 JASPAR yes 34700810
chr1 204388526 204388536 TBX21 JASPAR yes 118438244
chr1 204388527 204388535 MGA JASPAR yes 34700811
chr1 204388527 204388535 TBX1 JASPAR yes 34700812
chr1 204388527 204388535 MGA JASPAR yes 118438245
chr1 204388527 204388535 TBX1 JASPAR yes 118438246
chr1 204388561 204388572 BATF JASPAR yes 34700813
chr1 204388561 204388572 BATF JASPAR yes 118438247
chr1 204388585 204388591 MZF1 JASPAR yes 34700814
chr1 204388585 204388591 MZF1 JASPAR yes 118438248
chr1 204388595 204388603 HOXA5 JASPAR yes 34700815
chr1 204388595 204388603 HOXA5 JASPAR yes 118438249
chr1 204388597 204388614 BCL6B JASPAR yes 34700816
chr1 204388597 204388614 BCL6B JASPAR yes 118438250
chr1 204388602 204388613 EBF1 JASPAR yes 34700817
chr1 204388602 204388613 EBF1 JASPAR yes 118438251
chr1 204388603 204388618 HSF1 JASPAR yes 34700818
chr1 204388603 204388618 HSF1 JASPAR yes 118438252
SNP sites on vista4688[chr1:204388302-204388627]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 204388407 rs142059009 C T
JUN JUND
875990
chr1 204388444 rs12061084 C A no 875991
chr1 204388533 rs2942140 C T
EOMES MGA TBR1 TBX1 TBX2 TBX20 TBX21
875992
Genes possibly regulated by vista4688[chr1:204388302-204388627]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 204187979 204346793 - PLEKHA6 ENSG00000143850.8 204346793 0.89 1.0 1751 58491
chr1 204372515 204380919 - PPP1R15B ENSG00000158615.8 204380919 0.64 1.0 1752 92617
chr1 204391756 204463852 - PIK3C2B ENSG00000133056.9 204463852 0.73 1.0 1753 24775
chr1 204485511 204542871 + MDM4 ENSG00000198625.8 204485511 0.83 0.99 1754 3116
Expression level of Genes
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miRNAs possibly regulated by vista4688[chr1:204388302-204388627]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results