EnhancerDB
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  3. vista4729[chr1:205257253-205257766]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista4729[chr1:205257253-205257766]
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Tissue distribution of vista4729
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Transcription factor that possibly regulate vista4729[chr1:205257253-205257766]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 205257255 205257795 NFIC UCSC Txn Factor no Conserved 107861517
chr1 205257261 205257798 RUNX3 UCSC Txn Factor no Conserved 107861519
chr1 205257325 205257668 MEF2A UCSC Txn Factor no Conserved 107861525
chr1 205257332 205257770 MTA3 UCSC Txn Factor no Conserved 107861527
chr1 205257335 205257745 TBL1XR1 UCSC Txn Factor no Conserved 107861529
chr1 205257340 205257740 EP300 UCSC Txn Factor no Conserved 107861531
chr1 205257346 205257753 FOXM1 UCSC Txn Factor no Conserved 107861534
chr1 205257350 205257747 ATF2 UCSC Txn Factor no Conserved 107861537
chr1 205257355 205257686 EBF1 UCSC Txn Factor no Conserved 107861539
chr1 205257380 205257703 PAX5 UCSC Txn Factor no Conserved 107861551
chr1 205257390 205257683 SPI1 UCSC Txn Factor no Conserved 107861554
chr1 205257400 205257749 TCF12 UCSC Txn Factor no Conserved 107861557
chr1 205257409 205257672 BCL11A UCSC Txn Factor no Conserved 107861562
chr1 205257450 205257722 TCF3 UCSC Txn Factor no Conserved 107861574
chr1 205257243 205257264 ZNF263 JASPAR yes 34751771
chr1 205257243 205257264 ZNF263 JASPAR yes 118440160
chr1 205257268 205257277 NKX3-2 JASPAR yes 34751772
chr1 205257268 205257277 NKX3-2 JASPAR yes 118440161
chr1 205257271 205257283 FOXI1 JASPAR yes 34751773
chr1 205257271 205257283 FOXI1 JASPAR yes 118440162
chr1 205257274 205257278 YY1 TRANSFAC yes 34751774
chr1 205257274 205257278 YY1 TRANSFAC yes 118440163
chr1 205257275 205257287 FOXI1 JASPAR yes 34751775
chr1 205257275 205257287 FOXI1 JASPAR yes 118440164
chr1 205257275 205257290 FOXP1 JASPAR yes 34751776
chr1 205257275 205257290 FOXP1 JASPAR yes 118440165
chr1 205257276 205257287 FOXP2 JASPAR yes 34751777
chr1 205257276 205257287 FOXP2 JASPAR yes 118440166
chr1 205257276 205257288 FOXC2 JASPAR yes 34751778
chr1 205257276 205257288 FOXC2 JASPAR yes 118440167
chr1 205257276 205257290 FOXF2 JASPAR yes 34751779
chr1 205257276 205257290 FOXF2 JASPAR yes 118440168
chr1 205257277 205257285 FOXG1 JASPAR yes 34751780
chr1 205257277 205257285 FOXO3 JASPAR yes 34751781
chr1 205257277 205257285 FOXG1 JASPAR yes 118440169
chr1 205257277 205257285 FOXO3 JASPAR yes 118440170
chr1 205257282 205257286 YY1 TRANSFAC yes 34751782
chr1 205257282 205257286 YY1 TRANSFAC yes 118440171
chr1 205257317 205257328 USF2 JASPAR yes 34751783
chr1 205257317 205257328 USF2 JASPAR yes 118440172
chr1 205257317 205257329 PKNOX2 JASPAR yes 34751784
chr1 205257317 205257329 PKNOX2 JASPAR yes 118440173
chr1 205257318 205257329 USF1 JASPAR yes 34751785
chr1 205257318 205257329 USF1 JASPAR yes 118440174
chr1 205257320 205257325 USF2 TRANSFAC yes 34751786
chr1 205257320 205257325 USF2 TRANSFAC yes 118440175
chr1 205257362 205257368 NFE2 TRANSFAC yes 34751787
chr1 205257362 205257368 NFE2 TRANSFAC yes 118440176
chr1 205257408 205257423 RUNX2 JASPAR yes 34751788
chr1 205257408 205257423 RUNX2 JASPAR yes 118440177
chr1 205257409 205257418 RUNX2 JASPAR yes 34751789
chr1 205257409 205257418 RUNX2 JASPAR yes 118440178
chr1 205257420 205257424 NFE TRANSFAC yes 34751790
chr1 205257420 205257424 NFE TRANSFAC yes 118440179
chr1 205257432 205257435 MYB TRANSFAC yes 34751791
chr1 205257432 205257435 MYB TRANSFAC yes 118440180
chr1 205257432 205257447 MEF2A JASPAR yes 34751792
chr1 205257432 205257447 MEF2A JASPAR yes 118440181
chr1 205257433 205257448 MEF2C JASPAR yes 34751793
chr1 205257433 205257448 MEF2C JASPAR yes 118440182
chr1 205257434 205257446 MEF2B JASPAR yes 34751794
chr1 205257434 205257446 MEF2B JASPAR yes 118440183
chr1 205257446 205257459 ELF1 JASPAR yes 34751795
chr1 205257446 205257459 ELF1 JASPAR yes 118440184
chr1 205257449 205257460 FLI1 JASPAR yes 34751796
chr1 205257449 205257460 FLI1 JASPAR yes 118440185
chr1 205257450 205257458 EHF JASPAR yes 34751797
chr1 205257450 205257458 EHF JASPAR yes 118440186
chr1 205257497 205257518 ZNF263 JASPAR yes 34751798
chr1 205257497 205257518 ZNF263 JASPAR yes 118440187
chr1 205257501 205257522 ZNF263 JASPAR yes 34751799
chr1 205257501 205257522 ZNF263 JASPAR yes 118440188
chr1 205257521 205257535 STAT1 JASPAR yes 34751800
chr1 205257521 205257535 STAT1 JASPAR yes 118440189
chr1 205257522 205257534 IRF1 JASPAR yes 34751801
chr1 205257522 205257534 IRF1 JASPAR yes 118440190
chr1 205257527 205257537 ETV6 JASPAR yes 34751802
chr1 205257527 205257537 ETV6 JASPAR yes 118440191
chr1 205257527 205257541 SPI1 JASPAR yes 34751803
chr1 205257527 205257541 SPI1 JASPAR yes 118440192
chr1 205257543 205257546 MYB TRANSFAC yes 34751804
chr1 205257543 205257546 MYB TRANSFAC yes 118440193
chr1 205257558 205257576 IRF2 JASPAR yes 34751805
chr1 205257558 205257576 IRF2 JASPAR yes 118440194
chr1 205257559 205257580 IRF1 JASPAR yes 34751806
chr1 205257559 205257580 IRF1 JASPAR yes 118440195
chr1 205257561 205257576 PRDM1 JASPAR yes 34751807
chr1 205257561 205257576 STAT2 JASPAR yes 34751808
chr1 205257561 205257576 PRDM1 JASPAR yes 118440196
chr1 205257561 205257576 STAT2 JASPAR yes 118440197
chr1 205257562 205257576 STAT1 JASPAR yes 34751809
chr1 205257562 205257576 STAT1 JASPAR yes 118440198
chr1 205257563 205257575 IRF1 JASPAR yes 34751810
chr1 205257563 205257575 IRF1 JASPAR yes 118440199
chr1 205257563 205257578 IRF9 JASPAR yes 34751811
chr1 205257563 205257578 IRF9 JASPAR yes 118440200
chr1 205257576 205257587 ELK4 JASPAR yes 34751812
chr1 205257576 205257587 FLI1 JASPAR yes 34751813
chr1 205257576 205257587 ELK4 JASPAR yes 118440201
chr1 205257576 205257587 FLI1 JASPAR yes 118440202
chr1 205257577 205257587 ELK1 JASPAR yes 34751814
chr1 205257577 205257587 ELK3 JASPAR yes 34751815
chr1 205257577 205257587 ERF JASPAR yes 34751816
chr1 205257577 205257587 ERG JASPAR yes 34751817
chr1 205257577 205257587 ETS1 JASPAR yes 34751818
chr1 205257577 205257587 ETV1 JASPAR yes 34751819
chr1 205257577 205257587 ETV3 JASPAR yes 34751820
chr1 205257577 205257587 ETV4 JASPAR yes 34751821
chr1 205257577 205257587 ETV6 JASPAR yes 34751822
chr1 205257577 205257587 FEV JASPAR yes 34751823
chr1 205257577 205257587 FLI1 JASPAR yes 34751824
chr1 205257577 205257587 GABPA JASPAR yes 34751825
chr1 205257577 205257587 ELK1 JASPAR yes 118440203
chr1 205257577 205257587 ELK3 JASPAR yes 118440204
chr1 205257577 205257587 ERF JASPAR yes 118440205
chr1 205257577 205257587 ERG JASPAR yes 118440206
chr1 205257577 205257587 ETS1 JASPAR yes 118440207
chr1 205257577 205257587 ETV1 JASPAR yes 118440208
chr1 205257577 205257587 ETV3 JASPAR yes 118440209
chr1 205257577 205257587 ETV4 JASPAR yes 118440210
chr1 205257577 205257587 ETV6 JASPAR yes 118440211
chr1 205257577 205257587 FEV JASPAR yes 118440212
chr1 205257577 205257587 FLI1 JASPAR yes 118440213
chr1 205257577 205257587 GABPA JASPAR yes 118440214
chr1 205257577 205257588 ETV2 JASPAR yes 34751826
chr1 205257577 205257588 ETV2 JASPAR yes 118440215
chr1 205257577 205257589 ELF4 JASPAR yes 34751827
chr1 205257577 205257589 ELF4 JASPAR yes 118440216
chr1 205257577 205257590 ELF1 JASPAR yes 34751828
chr1 205257577 205257590 ELF1 JASPAR yes 118440217
chr1 205257578 205257585 SPI1 JASPAR yes 34751829
chr1 205257578 205257585 SPI1 JASPAR yes 118440218
chr1 205257578 205257586 EHF JASPAR yes 34751830
chr1 205257578 205257586 FEV JASPAR yes 34751831
chr1 205257578 205257586 EHF JASPAR yes 118440219
chr1 205257578 205257586 FEV JASPAR yes 118440220
chr1 205257590 205257596 TCF4 TRANSFAC yes 34751832
chr1 205257590 205257596 TCF4 TRANSFAC yes 118440221
chr1 205257600 205257612 NHLH1 JASPAR yes 34751833
chr1 205257600 205257612 NHLH1 JASPAR yes 118440222
chr1 205257601 205257611 NHLH1 JASPAR yes 34751834
chr1 205257601 205257611 NHLH1 JASPAR yes 118440223
chr1 205257610 205257625 HSF1 JASPAR yes 34751835
chr1 205257610 205257625 HSF1 JASPAR yes 118440224
chr1 205257621 205257631 SP1 JASPAR yes 34751836
chr1 205257621 205257631 SP1 JASPAR yes 118440225
chr1 205257624 205257629 SP1 TRANSFAC yes 34751837
chr1 205257624 205257629 SP1 TRANSFAC yes 118440226
chr1 205257633 205257654 REST JASPAR yes 34751838
chr1 205257633 205257654 REST JASPAR yes 118440227
chr1 205257640 205257652 NHLH1 JASPAR yes 34751839
chr1 205257640 205257652 NHLH1 JASPAR yes 118440228
chr1 205257641 205257651 NHLH1 JASPAR yes 34751840
chr1 205257641 205257651 NHLH1 JASPAR yes 118440229
chr1 205257649 205257657 EHF JASPAR yes 34751841
chr1 205257649 205257657 EHF JASPAR yes 118440230
chr1 205257649 205257669 ESR1 JASPAR yes 34751842
chr1 205257649 205257669 ESR1 JASPAR yes 118440231
chr1 205257651 205257661 NFKB1 JASPAR yes 34751843
chr1 205257651 205257661 NFKB1 JASPAR yes 118440232
chr1 205257652 205257672 PPARG JASPAR yes 34751844
chr1 205257652 205257672 PPARG JASPAR yes 118440233
chr1 205257655 205257659 H4TF2 TRANSFAC yes 34751845
chr1 205257655 205257659 H4TF2 TRANSFAC yes 118440234
chr1 205257667 205257671 TEAD2 TRANSFAC yes 34751846
chr1 205257667 205257671 TEAD2 TRANSFAC yes 118440235
chr1 205257667 205257672 TBP TRANSFAC yes 34751847
chr1 205257667 205257672 TBP TRANSFAC yes 118440236
chr1 205257669 205257683 NR2F1 JASPAR yes 34751848
chr1 205257669 205257683 NR2F1 JASPAR yes 118440237
chr1 205257675 205257685 MZF1 JASPAR yes 34751849
chr1 205257675 205257685 MZF1 JASPAR yes 118440238
chr1 205257686 205257690 YY1 TRANSFAC yes 34751850
chr1 205257686 205257690 YY1 TRANSFAC yes 118440239
chr1 205257715 205257730 PRDM1 JASPAR yes 34751851
chr1 205257715 205257730 PRDM1 JASPAR yes 118440240
chr1 205257720 205257741 IRF1 JASPAR yes 34751852
chr1 205257720 205257741 IRF1 JASPAR yes 118440241
chr1 205257722 205257737 PRDM1 JASPAR yes 34751853
chr1 205257722 205257737 PRDM1 JASPAR yes 118440242
chr1 205257724 205257745 IRF1 JASPAR yes 34751854
chr1 205257724 205257745 IRF1 JASPAR yes 118440243
chr1 205257725 205257740 FOXP1 JASPAR yes 34751855
chr1 205257725 205257740 FOXP1 JASPAR yes 118440244
chr1 205257729 205257750 IRF1 JASPAR yes 34751856
chr1 205257729 205257750 IRF1 JASPAR yes 118440245
chr1 205257731 205257746 FOXP1 JASPAR yes 34751857
chr1 205257731 205257746 FOXP1 JASPAR yes 118440246
chr1 205257735 205257756 IRF1 JASPAR yes 34751858
chr1 205257735 205257756 IRF1 JASPAR yes 118440247
chr1 205257736 205257757 IRF1 JASPAR yes 34751859
chr1 205257736 205257757 IRF1 JASPAR yes 118440248
chr1 205257737 205257752 STAT2 JASPAR yes 34751860
chr1 205257737 205257752 STAT2 JASPAR yes 118440249
chr1 205257740 205257755 FOXP1 JASPAR yes 34751861
chr1 205257740 205257755 FOXP1 JASPAR yes 118440250
chr1 205257741 205257756 FOXP1 JASPAR yes 34751862
chr1 205257741 205257756 FOXP1 JASPAR yes 118440251
chr1 205257741 205257761 RREB1 JASPAR yes 34751863
chr1 205257741 205257761 RREB1 JASPAR yes 118440252
chr1 205257741 205257762 IRF1 JASPAR yes 34751864
chr1 205257741 205257762 IRF1 JASPAR yes 118440253
chr1 205257742 205257763 IRF1 JASPAR yes 34751865
chr1 205257742 205257763 IRF1 JASPAR yes 118440254
chr1 205257743 205257758 FOXP1 JASPAR yes 34751866
chr1 205257743 205257758 FOXP1 JASPAR yes 118440255
chr1 205257748 205257754 TCF4 TRANSFAC yes 34751867
chr1 205257748 205257754 TCF4 TRANSFAC yes 118440256
chr1 205257748 205257763 FOXP1 JASPAR yes 34751868
chr1 205257748 205257763 FOXP1 JASPAR yes 118440257
chr1 205257749 205257760 FOXP2 JASPAR yes 34751869
chr1 205257749 205257760 FOXP2 JASPAR yes 118440258
chr1 205257749 205257761 FOXC2 JASPAR yes 34751870
chr1 205257749 205257761 FOXC2 JASPAR yes 118440259
chr1 205257749 205257764 STAT2 JASPAR yes 34751871
chr1 205257749 205257764 STAT2 JASPAR yes 118440260
chr1 205257750 205257765 FOXP1 JASPAR yes 34751872
chr1 205257750 205257765 FOXP1 JASPAR yes 118440261
SNP sites on vista4729[chr1:205257253-205257766]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 205257307 rs573294988 T G
NFIC RUNX3
881858
chr1 205257338 rs1562866 T C
MEF2A MTA3 NFIC RUNX3 TBL1XR1
881859
chr1 205257447 rs1172127 A G
ATF2 BCL11A EBF1 ELF1 EP300 FOXM1 MEF2A MEF2C MTA3 NFIC PAX5 RUNX3 SPI1 TBL1XR1 TCF12
881860
chr1 205257648 rs185145927 T G
ATF2 BCL11A EBF1 EP300 FOXM1 MEF2A MTA3 NFIC NHLH1 PAX5 REST RUNX3 SPI1 TBL1XR1 TCF12 TCF3
881861
chr1 205257764 rs77760757 T G
FOXP1 MTA3 NFIC RUNX3 STAT2
881862
Genes possibly regulated by vista4729[chr1:205257253-205257766]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 205111632 205180727 - DSTYK ENSG00000133059.12 205180727 0.65 0.99 1760 23474
chr1 205197304 205242471 + TMCC2 ENSG00000133069.10 205197304 0.81 1.0 1761 40051
chr1 205271187 205290883 - NUAK2 ENSG00000163545.7 205290883 0.81 0.97 1762 66883
chr1 205305220 205326218 - KLHDC8A ENSG00000162873.10 205326218 1.0 0.95 1763 31548
Expression level of Genes
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miRNAs possibly regulated by vista4729[chr1:205257253-205257766]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results