EnhancerDB
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  3. rs573294988[chr1:205257307]
Enhancers that have rs573294988[chr1:205257307]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 205243649 205259635 enh893
Bone Marrow (K562) Astrocyte Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Heart
chr1 205257253 205257766 vista4729
VISTA
Transcript factors that have rs573294988[chr1:205257307]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 205255826 205257674 ZNF143 GTRD no Epithelial (MCF-7) 21371469
chr1 205255826 205257674 ZNF143 GTRD no Epithelial (MCF-7) 107861506
chr1 205255845 205258730 ZNF143 GTRD no Epithelial (MCF-7) 21371476
chr1 205255845 205258730 ZNF143 GTRD no Epithelial (MCF-7) 107861507
chr1 205255998 205257424 ZNF143 GTRD no Epithelial (MCF-7) 21371507
chr1 205255998 205257424 ZNF143 GTRD no Epithelial (MCF-7) 107861508
chr1 205256033 205257810 ZNF143 GTRD no Epithelial (MCF-7) 21371516
chr1 205256033 205257810 ZNF143 GTRD no Epithelial (MCF-7) 107861509
chr1 205256097 205257506 TCF7L2 GTRD no Colon (HCT116) 107861510
chr1 205256120 205257759 ZNF143 GTRD no Epithelial (MCF-7) 21371534
chr1 205256120 205257759 ZNF143 GTRD no Epithelial (MCF-7) 107861511
chr1 205256772 205257781 TCF7L2 GTRD no Colon (HCT116) 107861513
chr1 205256795 205257325 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21371542
chr1 205256795 205257325 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107861514
chr1 205256927 205257638 ZNF274 GTRD no Bone Marrow (K562) 21371543
chr1 205256927 205257638 ZNF274 GTRD no Bone Marrow (K562) 107861515
chr1 205257206 205257427 ZNF274 GTRD no Bone Marrow (K562) 21371544
chr1 205257206 205257427 ZNF274 GTRD no Bone Marrow (K562) 107861516
chr1 205257255 205257795 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21371545
chr1 205257255 205257795 NFIC UCSC Txn Factor no Conserved 107861517
chr1 205257255 205257795 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107861518
chr1 205257261 205257798 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21371546
chr1 205257261 205257798 RUNX3 UCSC Txn Factor no Conserved 107861519
chr1 205257261 205257798 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107861520
chr1 205257290 205257620 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21371547
chr1 205257290 205257620 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107861521
chr1 205257290 205257746 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21371548
chr1 205257290 205257746 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107861522
chr1 205257294 205257674 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21371549
chr1 205257294 205257674 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107861523
chr1 205257299 205257663 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21371550
chr1 205257299 205257663 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107861524
Genes associated with rs573294988[chr1:205257307], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More