EnhancerDB
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  3. vista48170[chr5:78054058-78054218]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista48170[chr5:78054058-78054218]
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Tissue distribution of vista48170
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Transcription factor that possibly regulate vista48170[chr5:78054058-78054218]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr5 78053960 78054650 NFIC UCSC Txn Factor no Conserved 108535512
chr5 78053960 78054650 NFIC UCSC Txn Factor no Conserved 108535513
chr5 78053975 78054461 RUNX3 UCSC Txn Factor no Conserved 108535514
chr5 78053975 78054461 RUNX3 UCSC Txn Factor no Conserved 108535515
chr5 78054005 78054253 NR2F2 UCSC Txn Factor no Conserved 108535516
chr5 78054014 78054254 BATF UCSC Txn Factor no Conserved 108535517
chr5 78054041 78054292 FOXA1 UCSC Txn Factor no Conserved 108535518
chr5 78054050 78054064 IRF7 JASPAR yes 63622476
chr5 78054050 78054064 IRF7 JASPAR yes 70669895
chr5 78054072 78054076 NFE TRANSFAC yes 63622477
chr5 78054072 78054076 NFE TRANSFAC yes 70669896
chr5 78054079 78054097 ESR2 JASPAR yes 63622478
chr5 78054079 78054097 ESR2 JASPAR yes 70669897
chr5 78054081 78054096 ESR2 JASPAR yes 63622479
chr5 78054081 78054096 ESR2 JASPAR yes 70669898
chr5 78054081 78054101 ESR1 JASPAR yes 63622480
chr5 78054081 78054101 ESR1 JASPAR yes 70669899
chr5 78054082 78054103 IRF1 JASPAR yes 63622481
chr5 78054082 78054103 IRF1 JASPAR yes 70669900
chr5 78054084 78054099 PRDM1 JASPAR yes 63622482
chr5 78054084 78054099 STAT2 JASPAR yes 63622483
chr5 78054084 78054099 PRDM1 JASPAR yes 70669901
chr5 78054084 78054099 STAT2 JASPAR yes 70669902
chr5 78054091 78054110 CTCF JASPAR yes 63622484
chr5 78054091 78054110 CTCF JASPAR yes 70669903
chr5 78054105 78054109 ESR1 TRANSFAC yes 63622485
chr5 78054105 78054109 ESR1 TRANSFAC yes 70669904
chr5 78054131 78054142 FOS JASPAR yes 63622486
chr5 78054131 78054142 FOSL1 JASPAR yes 63622487
chr5 78054131 78054142 FOS JASPAR yes 70669905
chr5 78054131 78054142 FOSL1 JASPAR yes 70669906
chr5 78054132 78054141 JDP2 JASPAR yes 63622488
chr5 78054132 78054141 JDP2 JASPAR yes 70669907
chr5 78054133 78054144 BATF JASPAR yes 63622489
chr5 78054133 78054144 BATF JASPAR yes 70669908
chr5 78054135 78054150 IRF9 JASPAR yes 63622490
chr5 78054135 78054150 IRF9 JASPAR yes 70669909
chr5 78054160 78054178 RARA JASPAR yes 63622491
chr5 78054160 78054178 RARA JASPAR yes 70669910
chr5 78054164 78054178 RXRB JASPAR yes 63622492
chr5 78054164 78054178 RXRG JASPAR yes 63622493
chr5 78054164 78054178 RXRB JASPAR yes 70669911
chr5 78054164 78054178 RXRG JASPAR yes 70669912
chr5 78054167 78054180 NR2F1 JASPAR yes 63622494
chr5 78054167 78054180 NR2F1 JASPAR yes 70669913
chr5 78054169 78054180 ESRRA JASPAR yes 63622495
chr5 78054169 78054180 ESRRB JASPAR yes 63622496
chr5 78054169 78054180 ESRRA JASPAR yes 70669914
chr5 78054169 78054180 ESRRB JASPAR yes 70669915
chr5 78054170 78054185 HNF4A JASPAR yes 63622497
chr5 78054170 78054185 HNF4A JASPAR yes 70669916
chr5 78054171 78054181 RORA JASPAR yes 63622498
chr5 78054171 78054181 RORA JASPAR yes 70669917
chr5 78054171 78054185 NR2F1 JASPAR yes 63622499
chr5 78054171 78054185 RXRB JASPAR yes 63622500
chr5 78054171 78054185 RXRG JASPAR yes 63622501
chr5 78054171 78054185 NR2F1 JASPAR yes 70669918
chr5 78054171 78054185 RXRB JASPAR yes 70669919
chr5 78054171 78054185 RXRG JASPAR yes 70669920
chr5 78054171 78054186 HNF4G JASPAR yes 63622502
chr5 78054171 78054186 NR2C2 JASPAR yes 63622503
chr5 78054171 78054186 HNF4G JASPAR yes 70669921
chr5 78054171 78054186 NR2C2 JASPAR yes 70669922
chr5 78054178 78054181 MYB TRANSFAC yes 63622504
chr5 78054178 78054181 MYB TRANSFAC yes 70669923
chr5 78054178 78054189 RUNX1 JASPAR yes 63622505
chr5 78054178 78054189 RUNX1 JASPAR yes 70669924
chr5 78054185 78054197 FOXC2 JASPAR yes 63622506
chr5 78054185 78054197 FOXC2 JASPAR yes 70669925
chr5 78054187 78054198 FOXH1 JASPAR yes 63622507
chr5 78054187 78054198 FOXH1 JASPAR yes 70669926
chr5 78054204 78054220 SOX8 JASPAR yes 63622508
chr5 78054204 78054220 SOX8 JASPAR yes 70669927
SNP sites on vista48170[chr5:78054058-78054218]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr5 78054095 rs111232828 C T
BATF CTCF ESR1 ESR2 FOXA1 IRF1 NFIC NR2F2 PRDM1 RUNX3 STAT2
8329017
Genes possibly regulated by vista48170[chr5:78054058-78054218]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr5 77781038 78065844 - LHFPL2 ENSG00000145685.9 78065844 0.73 0.99 5484 88374
Expression level of Genes
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miRNAs possibly regulated by vista48170[chr5:78054058-78054218]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results