EnhancerDB
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  3. rs111232828[chr5:78054095]
Enhancers that have rs111232828[chr5:78054095]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 78038905 78058872 enh8512
Prostate (PC-3) Liver (HepG2) Brain (SK-N-SH) Lung (PC-9) Astrocyte Bone (Osteoblast) Blood (OCI-LY7) Blood (GM12878) Stomach Peripheral Blood (MM.1S) Uterus Blood (Karpas-422) Muscle (Myoblast) Pancreas Neural Stem Cells (H9) Epithelial (MCF-7)
chr5 78054058 78054218 vista48170
VISTA
Transcript factors that have rs111232828[chr5:78054095]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 78053960 78054650 NFIC UCSC Txn Factor no Conserved 108535512
chr5 78053960 78054650 NFIC UCSC Txn Factor no Conserved 108535513
chr5 78053975 78054461 RUNX3 UCSC Txn Factor no Conserved 108535514
chr5 78053975 78054461 RUNX3 UCSC Txn Factor no Conserved 108535515
chr5 78054005 78054253 NR2F2 UCSC Txn Factor no Conserved 108535516
chr5 78054014 78054254 BATF UCSC Txn Factor no Conserved 108535517
chr5 78054041 78054292 FOXA1 UCSC Txn Factor no Conserved 108535518
chr5 78054079 78054097 ESR2 JASPAR yes 63622478
chr5 78054079 78054097 ESR2 JASPAR yes 70669897
chr5 78054081 78054096 ESR2 JASPAR yes 63622479
chr5 78054081 78054096 ESR2 JASPAR yes 70669898
chr5 78054081 78054101 ESR1 JASPAR yes 63622480
chr5 78054081 78054101 ESR1 JASPAR yes 70669899
chr5 78054082 78054103 IRF1 JASPAR yes 63622481
chr5 78054082 78054103 IRF1 JASPAR yes 70669900
chr5 78054084 78054099 PRDM1 JASPAR yes 63622482
chr5 78054084 78054099 STAT2 JASPAR yes 63622483
chr5 78054084 78054099 PRDM1 JASPAR yes 70669901
chr5 78054084 78054099 STAT2 JASPAR yes 70669902
chr5 78054091 78054110 CTCF JASPAR yes 63622484
chr5 78054091 78054110 CTCF JASPAR yes 70669903
Genes associated with rs111232828[chr5:78054095], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More