EnhancerDB
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  3. vista48210[chr5:79487807-79488093]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista48210[chr5:79487807-79488093]
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Tissue distribution of vista48210
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Transcription factor that possibly regulate vista48210[chr5:79487807-79488093]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr5 79487803 79488509 POLR2A UCSC Txn Factor no Conserved 108535541
chr5 79487810 79487816 ESR1 TRANSFAC yes 63704410
chr5 79487810 79487816 ESR1 TRANSFAC yes 70671462
chr5 79487812 79487816 ESR1 TRANSFAC yes 63704411
chr5 79487812 79487816 ESR1 TRANSFAC yes 70671463
chr5 79487835 79487845 HOXA13 JASPAR yes 63704412
chr5 79487835 79487845 HOXB13 JASPAR yes 63704413
chr5 79487835 79487845 HOXD13 JASPAR yes 63704414
chr5 79487835 79487845 HOXA13 JASPAR yes 70671464
chr5 79487835 79487845 HOXB13 JASPAR yes 70671465
chr5 79487835 79487845 HOXD13 JASPAR yes 70671466
chr5 79487835 79487846 HOXA10 JASPAR yes 63704415
chr5 79487835 79487846 HOXA10 JASPAR yes 70671467
chr5 79487836 79487845 CDX1 JASPAR yes 63704416
chr5 79487836 79487845 CDX1 JASPAR yes 70671468
chr5 79487836 79487847 CDX2 JASPAR yes 63704417
chr5 79487836 79487847 CDX2 JASPAR yes 70671469
chr5 79487841 79487855 TLX1 JASPAR yes 63704418
chr5 79487841 79487855 TLX1 JASPAR yes 70671470
chr5 79487870 79487886 NFYA JASPAR yes 63704419
chr5 79487870 79487886 NFYA JASPAR yes 70671471
chr5 79487873 79487888 NFYB JASPAR yes 63704420
chr5 79487873 79487888 NFYB JASPAR yes 70671472
chr5 79487883 79487893 OLIG3 JASPAR yes 63704421
chr5 79487883 79487893 OLIG3 JASPAR yes 70671473
chr5 79487888 79487897 SRY JASPAR yes 63704422
chr5 79487888 79487897 SRY JASPAR yes 70671474
chr5 79487905 79487926 REST JASPAR yes 63704423
chr5 79487905 79487926 REST JASPAR yes 70671475
chr5 79487911 79487917 SOX10 JASPAR yes 63704424
chr5 79487911 79487917 SOX10 JASPAR yes 70671476
chr5 79487932 79487947 RUNX2 JASPAR yes 63704425
chr5 79487932 79487947 RUNX2 JASPAR yes 70671477
chr5 79487967 79487973 LEF1 TRANSFAC yes 63704426
chr5 79487967 79487973 SOX10 JASPAR yes 63704427
chr5 79487967 79487973 LEF1 TRANSFAC yes 70671478
chr5 79487967 79487973 SOX10 JASPAR yes 70671479
chr5 79487982 79487988 NFE2 TRANSFAC yes 63704428
chr5 79487982 79487988 NFE2 TRANSFAC yes 70671480
chr5 79487984 79487993 SP1 TRANSFAC yes 63704429
chr5 79487984 79487993 SP1 TRANSFAC yes 70671481
chr5 79488029 79488032 MYB TRANSFAC yes 63704430
chr5 79488029 79488032 MYB TRANSFAC yes 70671482
chr5 79488031 79488043 MYBL1 JASPAR yes 63704431
chr5 79488031 79488043 MYBL1 JASPAR yes 70671483
chr5 79488036 79488039 MYB TRANSFAC yes 63704432
chr5 79488036 79488039 MYB TRANSFAC yes 70671484
chr5 79488044 79488051 NKX3-1 JASPAR yes 63704433
chr5 79488044 79488051 NKX3-1 JASPAR yes 70671485
chr5 79488058 79488062 YY1 TRANSFAC yes 63704434
chr5 79488058 79488062 YY1 TRANSFAC yes 70671486
chr5 79488059 79488070 CEBPA JASPAR yes 63704435
chr5 79488059 79488070 CEBPA JASPAR yes 70671487
chr5 79488066 79488086 TP63 JASPAR yes 63704436
chr5 79488066 79488086 TP63 JASPAR yes 70671488
chr5 79488067 79488085 TP63 JASPAR yes 63704437
chr5 79488067 79488085 TP63 JASPAR yes 70671489
chr5 79488086 79488089 MYB TRANSFAC yes 63704438
chr5 79488086 79488089 MYB TRANSFAC yes 70671490
SNP sites on vista48210[chr5:79487807-79488093]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr5 79487835 rs3087814 A G
HOXA10 HOXA13 HOXB13 HOXD13 POLR2A
8336316
chr5 79487900 rs141592198 T A
POLR2A
8336317
chr5 79487920 rs6874464 G A
POLR2A REST
8336318
chr5 79487975 rs6896738 A G
POLR2A
8336319
chr5 79488024 rs139556340 T C
POLR2A
8336320
Genes possibly regulated by vista48210[chr5:79487807-79488093]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr5 79407050 79551898 - SERINC5 ENSG00000164300.11 79551898 0.78 1.0 5496 36195
Expression level of Genes
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miRNAs possibly regulated by vista48210[chr5:79487807-79488093]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results