EnhancerDB
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  3. rs3087814[chr5:79487835]
Enhancers that have rs3087814[chr5:79487835]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 79474525 79496555 enh22393
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
chr5 79487807 79488093 vista48210
VISTA
Transcript factors that have rs3087814[chr5:79487835]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 79487803 79488509 POLR2A UCSC Txn Factor no Conserved 108535541
chr5 79487835 79487845 HOXA13 JASPAR yes 63704412
chr5 79487835 79487845 HOXB13 JASPAR yes 63704413
chr5 79487835 79487845 HOXD13 JASPAR yes 63704414
chr5 79487835 79487845 HOXA13 JASPAR yes 70671464
chr5 79487835 79487845 HOXB13 JASPAR yes 70671465
chr5 79487835 79487845 HOXD13 JASPAR yes 70671466
chr5 79487835 79487846 HOXA10 JASPAR yes 63704415
chr5 79487835 79487846 HOXA10 JASPAR yes 70671467
Genes associated with rs3087814[chr5:79487835], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr5 78532012 78623038 + JMY ENSG00000152409.8 78532012 864797 Esophagus 0.110774 5490