EnhancerDB
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  3. vista48435[chr5:90478577-90478850]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista48435[chr5:90478577-90478850]
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Tissue distribution of vista48435
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Transcription factor that possibly regulate vista48435[chr5:90478577-90478850]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr5 90478626 90478639 ELF1 JASPAR yes 64174567
chr5 90478626 90478639 ELF1 JASPAR yes 70681978
chr5 90478626 90478640 SPI1 JASPAR yes 64174568
chr5 90478626 90478640 SPI1 JASPAR yes 70681979
chr5 90478627 90478648 ZNF263 JASPAR yes 64174569
chr5 90478627 90478648 ZNF263 JASPAR yes 70681980
chr5 90478628 90478649 ZNF263 JASPAR yes 64174570
chr5 90478628 90478649 ZNF263 JASPAR yes 70681981
chr5 90478629 90478636 SPIB JASPAR yes 64174571
chr5 90478629 90478636 SPIB JASPAR yes 70681982
chr5 90478631 90478652 ZNF263 JASPAR yes 64174572
chr5 90478631 90478652 ZNF263 JASPAR yes 70681983
chr5 90478634 90478655 ZNF263 JASPAR yes 64174573
chr5 90478634 90478655 ZNF263 JASPAR yes 70681984
chr5 90478638 90478649 FLI1 JASPAR yes 64174574
chr5 90478638 90478649 FLI1 JASPAR yes 70681985
chr5 90478639 90478652 ELF1 JASPAR yes 64174575
chr5 90478639 90478652 ELF1 JASPAR yes 70681986
chr5 90478639 90478653 SPI1 JASPAR yes 64174576
chr5 90478639 90478653 SPI1 JASPAR yes 70681987
chr5 90478646 90478660 SPI1 JASPAR yes 64174577
chr5 90478646 90478660 SPIC JASPAR yes 64174578
chr5 90478646 90478660 SPI1 JASPAR yes 70681988
chr5 90478646 90478660 SPIC JASPAR yes 70681989
chr5 90478647 90478655 EHF JASPAR yes 64174579
chr5 90478647 90478655 EHF JASPAR yes 70681990
chr5 90478649 90478654 ETS2 TRANSFAC yes 64174580
chr5 90478649 90478654 ETS2 TRANSFAC yes 70681991
chr5 90478654 90478658 YY1 TRANSFAC yes 64174581
chr5 90478654 90478658 YY1 TRANSFAC yes 70681992
chr5 90478662 90478666 YY1 TRANSFAC yes 64174582
chr5 90478662 90478666 YY1 TRANSFAC yes 70681993
chr5 90478677 90478683 SOX10 JASPAR yes 64174583
chr5 90478677 90478683 SOX10 JASPAR yes 70681994
chr5 90478714 90478733 CTCF JASPAR yes 64174584
chr5 90478714 90478733 CTCF JASPAR yes 70681995
chr5 90478722 90478739 RXRA JASPAR yes 64174585
chr5 90478722 90478739 RXRA JASPAR yes 70681996
chr5 90478743 90478758 ESR2 JASPAR yes 64174586
chr5 90478743 90478758 ESR2 JASPAR yes 70681997
chr5 90478757 90478765 FOXO3 JASPAR yes 64174587
chr5 90478757 90478765 FOXO3 JASPAR yes 70681998
chr5 90478761 90478776 RUNX2 JASPAR yes 64174588
chr5 90478761 90478776 RUNX2 JASPAR yes 70681999
chr5 90478763 90478774 TBX20 JASPAR yes 64174589
chr5 90478763 90478774 TBX20 JASPAR yes 70682000
chr5 90478765 90478773 TBX5 JASPAR yes 64174590
chr5 90478765 90478773 TBX5 JASPAR yes 70682001
chr5 90478772 90478776 TEAD2 TRANSFAC yes 64174591
chr5 90478772 90478776 TEAD2 TRANSFAC yes 70682002
chr5 90478772 90478782 ALX3 JASPAR yes 64174592
chr5 90478772 90478782 ALX3 JASPAR yes 70682003
chr5 90478776 90478781 MYB TRANSFAC yes 64174593
chr5 90478776 90478781 MYB TRANSFAC yes 70682004
chr5 90478785 90478789 YY1 TRANSFAC yes 64174594
chr5 90478785 90478789 YY1 TRANSFAC yes 70682005
chr5 90478798 90478808 HOXC10 JASPAR yes 64174595
chr5 90478798 90478808 HOXD11 JASPAR yes 64174596
chr5 90478798 90478808 HOXC10 JASPAR yes 70682006
chr5 90478798 90478808 HOXD11 JASPAR yes 70682007
chr5 90478798 90478809 HOXC11 JASPAR yes 64174597
chr5 90478798 90478809 HOXC12 JASPAR yes 64174598
chr5 90478798 90478809 HOXC13 JASPAR yes 64174599
chr5 90478798 90478809 HOXD12 JASPAR yes 64174600
chr5 90478798 90478809 HOXC11 JASPAR yes 70682008
chr5 90478798 90478809 HOXC12 JASPAR yes 70682009
chr5 90478798 90478809 HOXC13 JASPAR yes 70682010
chr5 90478798 90478809 HOXD12 JASPAR yes 70682011
chr5 90478808 90478812 NFE TRANSFAC yes 64174601
chr5 90478808 90478812 NFE TRANSFAC yes 70682012
chr5 90478836 90478840 NFE TRANSFAC yes 64174602
chr5 90478836 90478840 NFE TRANSFAC yes 70682013
chr5 90478841 90478853 IRF1 JASPAR yes 64174603
chr5 90478841 90478853 IRF1 JASPAR yes 70682014
chr5 90478849 90478861 NHLH1 JASPAR yes 64174604
chr5 90478849 90478861 NHLH1 JASPAR yes 70682015
chr5 90478850 90478860 TFAP4 JASPAR yes 64174605
chr5 90478850 90478860 TFAP4 JASPAR yes 70682016
SNP sites on vista48435[chr5:90478577-90478850]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr5 90478606 rs546198118 A G no 8372130
chr5 90478787 rs144227005 A G
YY1
8372131
chr5 90478797 rs75100104 G A no 8372132
chr5 90478805 rs2941877 C T
HOXC10 HOXC11 HOXC12 HOXC13 HOXD11 HOXD12
8372133
chr5 90478827 rs189130663 G T no 8372134
Genes possibly regulated by vista48435[chr5:90478577-90478850]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
Expression level of Genes
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No results
miRNAs possibly regulated by vista48435[chr5:90478577-90478850]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results