EnhancerDB
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  3. rs2941877[chr5:90478805]
Enhancers that have rs2941877[chr5:90478805]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 90450185 90481862 enh22423
Prostate (PC-3) Brain (SK-N-MC) Esophagus Liver Lung (A549) Muscle (A673) Placenta Thyroid Uterus Peripheral Blood (MM.1S) Muscle (Myotube) Neural Stem Cells (H9) Stomach
chr5 90478577 90478850 vista48435
VISTA
Transcript factors that have rs2941877[chr5:90478805]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 90478798 90478808 HOXC10 JASPAR yes 64174595
chr5 90478798 90478808 HOXD11 JASPAR yes 64174596
chr5 90478798 90478808 HOXC10 JASPAR yes 70682006
chr5 90478798 90478808 HOXD11 JASPAR yes 70682007
chr5 90478798 90478809 HOXC11 JASPAR yes 64174597
chr5 90478798 90478809 HOXC12 JASPAR yes 64174598
chr5 90478798 90478809 HOXC13 JASPAR yes 64174599
chr5 90478798 90478809 HOXD12 JASPAR yes 64174600
chr5 90478798 90478809 HOXC11 JASPAR yes 70682008
chr5 90478798 90478809 HOXC12 JASPAR yes 70682009
chr5 90478798 90478809 HOXC13 JASPAR yes 70682010
chr5 90478798 90478809 HOXD12 JASPAR yes 70682011
Genes associated with rs2941877[chr5:90478805], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More