EnhancerDB
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  3. vista48509[chr5:95178953-95179190]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista48509[chr5:95178953-95179190]
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Tissue distribution of vista48509
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Transcription factor that possibly regulate vista48509[chr5:95178953-95179190]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr5 95178691 95179147 RUNX3 UCSC Txn Factor no Conserved 108535788
chr5 95178702 95179260 MAX UCSC Txn Factor no Conserved 108535789
chr5 95178722 95179219 CTCF UCSC Txn Factor no Conserved 108535790
chr5 95178854 95179125 RAD21 UCSC Txn Factor no Conserved 108535791
chr5 95178860 95179132 SMC3 UCSC Txn Factor no Conserved 108535792
chr5 95178992 95179011 CTCF JASPAR yes 64385146
chr5 95178992 95179011 CTCF JASPAR yes 70685350
chr5 95179000 95179015 RFX5 JASPAR yes 64385147
chr5 95179000 95179015 RFX5 JASPAR yes 70685351
chr5 95179025 95179038 DUXA JASPAR yes 64385148
chr5 95179025 95179038 DUXA JASPAR yes 70685352
chr5 95179026 95179037 DUX4 JASPAR yes 64385149
chr5 95179026 95179037 DUX4 JASPAR yes 70685353
chr5 95179051 95179058 SPIB JASPAR yes 64385150
chr5 95179051 95179058 SPIB JASPAR yes 70685354
chr5 95179062 95179075 NR2F1 JASPAR yes 64385151
chr5 95179062 95179075 NR2F1 JASPAR yes 70685355
chr5 95179066 95179070 ESR1 TRANSFAC yes 64385152
chr5 95179066 95179070 ESR1 TRANSFAC yes 70685356
chr5 95179101 95179105 YY1 TRANSFAC yes 64385153
chr5 95179101 95179105 YY1 TRANSFAC yes 70685357
chr5 95179123 95179138 FOXP1 JASPAR yes 64385154
chr5 95179123 95179138 FOXP1 JASPAR yes 70685358
chr5 95179126 95179134 FOXO3 JASPAR yes 64385155
chr5 95179126 95179134 FOXO3 JASPAR yes 70685359
chr5 95179128 95179135 NFATC2 JASPAR yes 64385156
chr5 95179128 95179135 NFATC2 JASPAR yes 70685360
chr5 95179162 95179171 NKX3-2 JASPAR yes 64385157
chr5 95179162 95179171 NKX3-2 JASPAR yes 70685361
SNP sites on vista48509[chr5:95178953-95179190]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr5 95178954 rs6556889 C T
CTCF MAX RAD21 RUNX3 SMC3
8386586
chr5 95179041 rs7716279 C T
CTCF MAX RAD21 RUNX3 SMC3
8386587
chr5 95179082 rs148412055 C T
CTCF MAX RAD21 RUNX3 SMC3
8386588
chr5 95179105 rs114397192 T G
CTCF MAX RAD21 RUNX3 SMC3 YY1
8386589
chr5 95179171 rs369435996 T C
CTCF MAX NKX3-2
8386590
Genes possibly regulated by vista48509[chr5:95178953-95179190]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr5 95087023 95158709 - GLRX ENSG00000173221.9 95158709 0.81 1.0 5542 79756
chr5 95187936 95195837 + C5orf27 ENSG00000236882.3 95187936 1.0 0.92 5543 91254
Expression level of Genes
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miRNAs possibly regulated by vista48509[chr5:95178953-95179190]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results