EnhancerDB
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  3. rs6556889[chr5:95178954]
Enhancers that have rs6556889[chr5:95178954]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 95166465 95182255 enh8570
Bone Marrow (K562) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Blood (T-cell) Lung (PC-9) Esophagus Astrocyte Bone (Osteoblast) Blood (GM12878) Stomach Placenta Peripheral Blood (MM.1S) Blood (Karpas-422) Muscle (Myoblast) Breast Pancreas (Panc1) Uterus Thymus Epithelial (MCF-7)
chr5 95178953 95179190 vista48509
VISTA
Transcript factors that have rs6556889[chr5:95178954]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 95178691 95179147 RUNX3 UCSC Txn Factor no Conserved 108535788
chr5 95178702 95179260 MAX UCSC Txn Factor no Conserved 108535789
chr5 95178722 95179219 CTCF UCSC Txn Factor no Conserved 108535790
chr5 95178854 95179125 RAD21 UCSC Txn Factor no Conserved 108535791
chr5 95178860 95179132 SMC3 UCSC Txn Factor no Conserved 108535792
Genes associated with rs6556889[chr5:95178954], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More