EnhancerDB
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  3. vista4890[chr1:209542596-209542897]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista4890[chr1:209542596-209542897]
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Tissue distribution of vista4890
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Transcription factor that possibly regulate vista4890[chr1:209542596-209542897]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 209542572 209542787 FOS UCSC Txn Factor no Conserved 107865676
chr1 209542642 209542647 MYC TRANSFAC yes 34967917
chr1 209542642 209542647 MYC TRANSFAC yes 118447909
chr1 209542651 209542661 NFATC3 JASPAR yes 34967918
chr1 209542651 209542661 NFATC3 JASPAR yes 118447910
chr1 209542653 209542660 NFATC2 JASPAR yes 34967919
chr1 209542653 209542660 NFATC2 JASPAR yes 118447911
chr1 209542666 209542680 JUN JASPAR yes 34967920
chr1 209542666 209542680 JUN JASPAR yes 118447912
chr1 209542669 209542680 FOSL2 JASPAR yes 34967921
chr1 209542669 209542680 JUNB JASPAR yes 34967922
chr1 209542669 209542680 FOSL2 JASPAR yes 118447913
chr1 209542669 209542680 JUNB JASPAR yes 118447914
chr1 209542670 209542681 FOS JASPAR yes 34967923
chr1 209542670 209542681 FOSL1 JASPAR yes 34967924
chr1 209542670 209542681 JUND JASPAR yes 34967925
chr1 209542670 209542681 NFE2 JASPAR yes 34967926
chr1 209542670 209542681 FOS JASPAR yes 118447915
chr1 209542670 209542681 FOSL1 JASPAR yes 118447916
chr1 209542670 209542681 JUND JASPAR yes 118447917
chr1 209542670 209542681 NFE2 JASPAR yes 118447918
chr1 209542671 209542678 JUN TRANSFAC yes 34967927
chr1 209542671 209542678 JUN TRANSFAC yes 118447919
chr1 209542671 209542680 JDP2 JASPAR yes 34967928
chr1 209542671 209542680 JDP2 JASPAR yes 118447920
chr1 209542671 209542682 FOSL2 JASPAR yes 34967929
chr1 209542671 209542682 JUNB JASPAR yes 34967930
chr1 209542671 209542682 FOSL2 JASPAR yes 118447921
chr1 209542671 209542682 JUNB JASPAR yes 118447922
chr1 209542671 209542685 JUN JASPAR yes 34967931
chr1 209542671 209542685 JUN JASPAR yes 118447923
chr1 209542684 209542688 YY1 TRANSFAC yes 34967932
chr1 209542684 209542688 YY1 TRANSFAC yes 118447924
chr1 209542698 209542702 YY1 TRANSFAC yes 34967933
chr1 209542698 209542702 YY1 TRANSFAC yes 118447925
chr1 209542712 209542721 THAP1 JASPAR yes 34967934
chr1 209542712 209542721 THAP1 JASPAR yes 118447926
chr1 209542715 209542719 LFA1 TRANSFAC yes 34967935
chr1 209542715 209542719 LFA1 TRANSFAC yes 118447927
chr1 209542733 209542754 ZNF263 JASPAR yes 34967936
chr1 209542733 209542754 ZNF263 JASPAR yes 118447928
chr1 209542736 209542741 SP1 TRANSFAC yes 34967937
chr1 209542736 209542741 SP1 TRANSFAC yes 118447929
chr1 209542737 209542747 SP1 JASPAR yes 34967938
chr1 209542737 209542747 SP1 JASPAR yes 118447930
chr1 209542738 209542759 ZNF263 JASPAR yes 34967939
chr1 209542738 209542759 ZNF263 JASPAR yes 118447931
chr1 209542740 209542761 ZNF263 JASPAR yes 34967940
chr1 209542740 209542761 ZNF263 JASPAR yes 118447932
chr1 209542744 209542749 ETS2 TRANSFAC yes 34967941
chr1 209542744 209542749 ETS2 TRANSFAC yes 118447933
chr1 209542748 209542758 SP1 JASPAR yes 34967942
chr1 209542748 209542758 SP1 JASPAR yes 118447934
chr1 209542749 209542758 SP1 TRANSFAC yes 34967943
chr1 209542749 209542758 SP1 TRANSFAC yes 118447935
chr1 209542750 209542756 MAZ TRANSFAC yes 34967944
chr1 209542750 209542756 MAZ TRANSFAC yes 118447936
chr1 209542778 209542782 NFE TRANSFAC yes 34967945
chr1 209542778 209542782 NFE TRANSFAC yes 118447937
chr1 209542778 209542783 GATA1 TRANSFAC yes 34967946
chr1 209542778 209542783 GATA1 TRANSFAC yes 118447938
chr1 209542778 209542784 GATA3 JASPAR yes 34967947
chr1 209542778 209542784 GATA3 JASPAR yes 118447939
chr1 209542782 209542789 JUN TRANSFAC yes 34967948
chr1 209542782 209542789 JUN TRANSFAC yes 118447940
chr1 209542787 209542805 SRF JASPAR yes 34967949
chr1 209542787 209542805 SRF JASPAR yes 118447941
chr1 209542823 209542835 BHLHE23 JASPAR yes 34967950
chr1 209542823 209542835 BHLHE23 JASPAR yes 118447942
chr1 209542824 209542834 BHLHE22 JASPAR yes 34967951
chr1 209542824 209542834 OLIG1 JASPAR yes 34967952
chr1 209542824 209542834 OLIG2 JASPAR yes 34967953
chr1 209542824 209542834 OLIG3 JASPAR yes 34967954
chr1 209542824 209542834 BHLHE22 JASPAR yes 118447943
chr1 209542824 209542834 OLIG1 JASPAR yes 118447944
chr1 209542824 209542834 OLIG2 JASPAR yes 118447945
chr1 209542824 209542834 OLIG3 JASPAR yes 118447946
chr1 209542828 209542843 STAT2 JASPAR yes 34967955
chr1 209542828 209542843 STAT2 JASPAR yes 118447947
SNP sites on vista4890[chr1:209542596-209542897]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 209542655 rs546597022 G T
FOS NFATC2 NFATC3
905540
chr1 209542656 rs544844570 G GA
FOS NFATC2 NFATC3
905541
chr1 209542809 rs182530413 C A,G,T no 905542
chr1 209542828 rs190531378 G A
BHLHE22 BHLHE23 OLIG1 OLIG2 OLIG3 STAT2
905543
Genes possibly regulated by vista4890[chr1:209542596-209542897]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
Expression level of Genes
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No results
miRNAs possibly regulated by vista4890[chr1:209542596-209542897]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
chr1 209605548 209605568 + hsa-miR-205-3p MIMAT0009197 209602164 2.524423800267589e-05 0.947205 0.692021 121
Expression level of miRNAs
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