EnhancerDB
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  3. rs190531378[chr1:209542828]
Enhancers that have rs190531378[chr1:209542828]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 209534505 209546445 enh27449
Prostate (PC-3) Cervix (HeLa-S3) Prostate (RWPE1) Esophagus Astrocyte Lung (PC-9) Breast Muscle (Myotube) Uterus
chr1 209542596 209542897 vista4890
VISTA
Transcript factors that have rs190531378[chr1:209542828]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 209542269 209543852 ZBTB33 GTRD no Brain (SK-N-SH) 107865660
chr1 209542288 209543767 ZBTB33 GTRD no Brain (SK-N-SH) 107865661
chr1 209542317 209543742 ZBTB33 GTRD no Brain (SK-N-SH) 107865662
chr1 209542329 209543677 ZBTB33 GTRD no Brain (SK-N-SH) 107865663
chr1 209542336 209543440 ZBTB33 GTRD no Brain (SK-N-SH) 107865664
chr1 209542407 209543458 ZBTB33 GTRD no Brain (SK-N-SH) 107865665
chr1 209542408 209543739 ZBTB33 GTRD no Brain (SK-N-SH) 107865666
chr1 209542432 209543493 ZBTB33 GTRD no Brain (SK-N-SH) 107865667
chr1 209542453 209542868 ZNF143 GTRD no Epithelial (MCF-7) 107865668
chr1 209542458 209542868 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 107865669
chr1 209542466 209543120 P63 GTRD no Skin (Keratinocyte) 107865670
chr1 209542483 209542839 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 107865671
chr1 209542491 209542977 ZNF274 GTRD no Bone Marrow (K562) 107865672
chr1 209542524 209542844 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21375167
chr1 209542524 209542844 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107865673
chr1 209542549 209543149 TCF7L2 GTRD no Colon (HCT116) 107865675
chr1 209542644 209542945 TCF7L2 GTRD no Colon (HCT116) 107865677
chr1 209542669 209542943 ZNF274 GTRD no Bone Marrow (K562) 107865678
chr1 209542741 209542951 TCF7L2 GTRD no Colon (HCT116) 107865679
chr1 209542823 209542835 BHLHE23 JASPAR yes 34967950
chr1 209542823 209542835 BHLHE23 JASPAR yes 118447942
chr1 209542824 209542834 BHLHE22 JASPAR yes 34967951
chr1 209542824 209542834 OLIG1 JASPAR yes 34967952
chr1 209542824 209542834 OLIG2 JASPAR yes 34967953
chr1 209542824 209542834 OLIG3 JASPAR yes 34967954
chr1 209542824 209542834 BHLHE22 JASPAR yes 118447943
chr1 209542824 209542834 OLIG1 JASPAR yes 118447944
chr1 209542824 209542834 OLIG2 JASPAR yes 118447945
chr1 209542824 209542834 OLIG3 JASPAR yes 118447946
chr1 209542828 209542843 STAT2 JASPAR yes 34967955
chr1 209542828 209542843 STAT2 JASPAR yes 118447947
Genes associated with rs190531378[chr1:209542828], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More