EnhancerDB
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  3. vista4958[chr1:211500826-211501119]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista4958[chr1:211500826-211501119]
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Tissue distribution of vista4958
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Transcription factor that possibly regulate vista4958[chr1:211500826-211501119]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 211499701 211501475 POLR2A UCSC Txn Factor no Conserved 107867191
chr1 211500955 211501139 SRF UCSC Txn Factor no Conserved 107867202
chr1 211500868 211500880 TFAP2A JASPAR yes 35052743
chr1 211500868 211500880 TFAP2B JASPAR yes 35052744
chr1 211500868 211500880 TFAP2C JASPAR yes 35052745
chr1 211500868 211500880 TFAP2A JASPAR yes 118451036
chr1 211500868 211500880 TFAP2B JASPAR yes 118451037
chr1 211500868 211500880 TFAP2C JASPAR yes 118451038
chr1 211500868 211500883 TFAP2A JASPAR yes 35052746
chr1 211500868 211500883 TFAP2A JASPAR yes 118451039
chr1 211500910 211500922 TAL1 JASPAR yes 35052747
chr1 211500910 211500922 TAL1 JASPAR yes 118451040
chr1 211500912 211500922 OLIG1 JASPAR yes 35052748
chr1 211500912 211500922 OLIG3 JASPAR yes 35052749
chr1 211500912 211500922 OLIG1 JASPAR yes 118451041
chr1 211500912 211500922 OLIG3 JASPAR yes 118451042
chr1 211500912 211500924 TAL1 JASPAR yes 35052750
chr1 211500912 211500924 TAL1 JASPAR yes 118451043
chr1 211500927 211500933 LEF1 TRANSFAC yes 35052751
chr1 211500927 211500933 SOX10 JASPAR yes 35052752
chr1 211500927 211500933 LEF1 TRANSFAC yes 118451044
chr1 211500927 211500933 SOX10 JASPAR yes 118451045
chr1 211500956 211500967 STAT1 JASPAR yes 35052753
chr1 211500956 211500967 STAT3 JASPAR yes 35052754
chr1 211500956 211500967 STAT1 JASPAR yes 118451046
chr1 211500956 211500967 STAT3 JASPAR yes 118451047
chr1 211500971 211500976 SP1 TRANSFAC yes 35052755
chr1 211500971 211500976 SP1 TRANSFAC yes 118451048
chr1 211500985 211500996 GCM1 JASPAR yes 35052756
chr1 211500985 211500996 GCM1 JASPAR yes 118451049
chr1 211500990 211501004 PLAG1 JASPAR yes 35052757
chr1 211500990 211501004 PLAG1 JASPAR yes 118451050
chr1 211500991 211500995 H4TF2 TRANSFAC yes 35052758
chr1 211500991 211500995 H4TF2 TRANSFAC yes 118451051
chr1 211500993 211501007 PLAG1 JASPAR yes 35052759
chr1 211500993 211501007 PLAG1 JASPAR yes 118451052
chr1 211501017 211501032 PRDM1 JASPAR yes 35052760
chr1 211501017 211501032 PRDM1 JASPAR yes 118451053
chr1 211501022 211501043 ZNF263 JASPAR yes 35052761
chr1 211501022 211501043 ZNF263 JASPAR yes 118451054
chr1 211501049 211501064 STAT2 JASPAR yes 35052762
chr1 211501049 211501064 STAT2 JASPAR yes 118451055
chr1 211501050 211501063 POU3F3 JASPAR yes 35052763
chr1 211501050 211501063 POU3F3 JASPAR yes 118451056
chr1 211501051 211501061 NFATC3 JASPAR yes 35052764
chr1 211501051 211501061 NFATC3 JASPAR yes 118451057
chr1 211501051 211501069 SRF JASPAR yes 35052765
chr1 211501051 211501069 SRF JASPAR yes 118451058
chr1 211501053 211501069 SRF JASPAR yes 35052766
chr1 211501053 211501069 SRF JASPAR yes 118451059
chr1 211501053 211501071 SRF JASPAR yes 35052767
chr1 211501053 211501071 SRF JASPAR yes 118451060
chr1 211501054 211501066 SRF JASPAR yes 35052768
chr1 211501054 211501066 SRF JASPAR yes 118451061
chr1 211501056 211501068 SRF JASPAR yes 35052769
chr1 211501056 211501068 SRF JASPAR yes 118451062
chr1 211501059 211501063 YY1 TRANSFAC yes 35052770
chr1 211501059 211501063 YY1 TRANSFAC yes 118451063
chr1 211501067 211501071 YY1 TRANSFAC yes 35052771
chr1 211501067 211501071 YY1 TRANSFAC yes 118451064
chr1 211501069 211501090 IRF1 JASPAR yes 35052772
chr1 211501069 211501090 IRF1 JASPAR yes 118451065
chr1 211501073 211501087 IRF7 JASPAR yes 35052773
chr1 211501073 211501087 IRF7 JASPAR yes 118451066
SNP sites on vista4958[chr1:211500826-211501119]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 211500941 rs75917098 C A
POLR2A
915295
chr1 211500957 rs180852400 G A
POLR2A SRF STAT1 STAT3
915296
chr1 211500984 rs553119497 T C
POLR2A SRF
915297
chr1 211500998 rs115393564 A G,T
PLAG1 POLR2A SRF
915298
Genes possibly regulated by vista4958[chr1:211500826-211501119]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 211431719 211489727 + RCOR3 ENSG00000117625.9 211431719 0.75 0.99 1817 30893
chr1 211499957 211548288 + TRAF5 ENSG00000082512.10 211499957 0.74 0.99 1818 99131
Expression level of Genes
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miRNAs possibly regulated by vista4958[chr1:211500826-211501119]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results