EnhancerDB
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  3. rs180852400[chr1:211500957]
Enhancers that have rs180852400[chr1:211500957]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 211498150 211519175 enh904
Cervix (HeLa-S3) Large Intestine Blood (T-cell) Esophagus Bone (Osteoblast) Blood (OCI-LY7) Blood (GM12878) Stomach Peripheral Blood (MM.1S) Blood (Karpas-422) Pancreas Muscle (Myotube) Thymus Epithelial (MCF-7)
chr1 211500826 211501119 vista4958
VISTA
Transcript factors that have rs180852400[chr1:211500957]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 211499701 211501475 POLR2A UCSC Txn Factor no Conserved 107867191
chr1 211500362 211501032 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107867193
chr1 211500557 211501475 TCF7L2 GTRD no Colon (HCT116) 107867195
chr1 211500588 211501272 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21375806
chr1 211500588 211501272 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107867196
chr1 211500668 211501068 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21375807
chr1 211500668 211501068 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107867197
chr1 211500705 211501225 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21375808
chr1 211500705 211501225 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107867198
chr1 211500717 211501310 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21375809
chr1 211500717 211501310 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107867199
chr1 211500813 211501253 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107867200
chr1 211500954 211501230 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107867201
chr1 211500955 211501139 SRF UCSC Txn Factor no Conserved 107867202
chr1 211500955 211501139 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107867203
chr1 211500956 211500967 STAT1 JASPAR yes 35052753
chr1 211500956 211500967 STAT3 JASPAR yes 35052754
chr1 211500956 211500967 STAT1 JASPAR yes 118451046
chr1 211500956 211500967 STAT3 JASPAR yes 118451047
Genes associated with rs180852400[chr1:211500957], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More