EnhancerDB
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  3. vista49649[chr5:149696810-149697163]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista49649[chr5:149696810-149697163]
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Tissue distribution of vista49649
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Transcription factor that possibly regulate vista49649[chr5:149696810-149697163]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr5 149696287 149697163 NR3C1 UCSC Txn Factor no Conserved 108536970
chr5 149696557 149697203 EP300 UCSC Txn Factor no Conserved 108536971
chr5 149696655 149697198 FOSL2 UCSC Txn Factor no Conserved 108536972
chr5 149696753 149697186 FOS UCSC Txn Factor no Conserved 108536973
chr5 149696754 149697157 TCF12 UCSC Txn Factor no Conserved 108536974
chr5 149696790 149696810 TP63 JASPAR yes 66873452
chr5 149696790 149696810 TP63 JASPAR yes 70738350
chr5 149696811 149696816 SP1 TRANSFAC yes 66873457
chr5 149696811 149696816 SP1 TRANSFAC yes 70738351
chr5 149696818 149696822 H4TF2 TRANSFAC yes 66873458
chr5 149696818 149696822 H4TF2 TRANSFAC yes 70738352
chr5 149696827 149696842 RUNX2 JASPAR yes 66873459
chr5 149696827 149696842 RUNX2 JASPAR yes 70738353
chr5 149696849 149696864 TFAP2A JASPAR yes 66873460
chr5 149696849 149696864 TFAP2A JASPAR yes 70738354
chr5 149696850 149696864 EBF1 JASPAR yes 66873461
chr5 149696850 149696864 EBF1 JASPAR yes 70738355
chr5 149696851 149696865 GLIS3 JASPAR yes 66873462
chr5 149696851 149696865 GLIS3 JASPAR yes 70738356
chr5 149696851 149696866 TFAP2C JASPAR yes 66873463
chr5 149696851 149696866 TFAP2C JASPAR yes 70738357
chr5 149696852 149696863 EBF1 JASPAR yes 66873464
chr5 149696852 149696863 EBF1 JASPAR yes 70738358
chr5 149696852 149696864 TFAP2A JASPAR yes 66873465
chr5 149696852 149696864 TFAP2B JASPAR yes 66873466
chr5 149696852 149696864 TFAP2C JASPAR yes 66873467
chr5 149696852 149696864 TFAP2A JASPAR yes 70738359
chr5 149696852 149696864 TFAP2B JASPAR yes 70738360
chr5 149696852 149696864 TFAP2C JASPAR yes 70738361
chr5 149696864 149696879 ESR2 JASPAR yes 66873468
chr5 149696864 149696879 ESR2 JASPAR yes 70738362
chr5 149696869 149696882 NR2F1 JASPAR yes 66873469
chr5 149696869 149696882 NR2F1 JASPAR yes 70738363
chr5 149696873 149696890 RARA JASPAR yes 66873470
chr5 149696873 149696890 RARA JASPAR yes 70738364
chr5 149696878 149696889 FOS JASPAR yes 66873471
chr5 149696878 149696889 FOSL1 JASPAR yes 66873472
chr5 149696878 149696889 JUND JASPAR yes 66873473
chr5 149696878 149696889 FOS JASPAR yes 70738365
chr5 149696878 149696889 FOSL1 JASPAR yes 70738366
chr5 149696878 149696889 JUND JASPAR yes 70738367
chr5 149696879 149696890 FOSL2 JASPAR yes 66873474
chr5 149696879 149696890 JUNB JASPAR yes 66873475
chr5 149696879 149696890 FOSL2 JASPAR yes 70738368
chr5 149696879 149696890 JUNB JASPAR yes 70738369
chr5 149696879 149696893 JUN JASPAR yes 66873476
chr5 149696879 149696893 JUN JASPAR yes 70738370
chr5 149696885 149696890 MYC TRANSFAC yes 66873477
chr5 149696885 149696890 MYC TRANSFAC yes 70738371
chr5 149696906 149696917 FOSL2 JASPAR yes 66873478
chr5 149696906 149696917 JUNB JASPAR yes 66873479
chr5 149696906 149696917 FOSL2 JASPAR yes 70738372
chr5 149696906 149696917 JUNB JASPAR yes 70738373
chr5 149696907 149696918 FOS JASPAR yes 66873480
chr5 149696907 149696918 FOSL1 JASPAR yes 66873481
chr5 149696907 149696918 JUND JASPAR yes 66873482
chr5 149696907 149696918 FOS JASPAR yes 70738374
chr5 149696907 149696918 FOSL1 JASPAR yes 70738375
chr5 149696907 149696918 JUND JASPAR yes 70738376
chr5 149696908 149696919 JUNB JASPAR yes 66873483
chr5 149696908 149696919 NFE2L2 JASPAR yes 66873484
chr5 149696908 149696919 JUNB JASPAR yes 70738377
chr5 149696908 149696919 NFE2L2 JASPAR yes 70738378
chr5 149696909 149696916 JUN TRANSFAC yes 66873485
chr5 149696909 149696916 JUN TRANSFAC yes 70738379
chr5 149696924 149696930 SOX10 JASPAR yes 66873486
chr5 149696924 149696930 SOX10 JASPAR yes 70738380
chr5 149696947 149696962 TFAP2C JASPAR yes 66873487
chr5 149696947 149696962 TFAP2C JASPAR yes 70738381
chr5 149696980 149696993 SMAD2 JASPAR yes 66873488
chr5 149696980 149696993 SMAD2 JASPAR yes 70738382
chr5 149697038 149697044 ESR1 TRANSFAC yes 66873489
chr5 149697038 149697044 ESR1 TRANSFAC yes 70738383
chr5 149697040 149697044 ESR1 TRANSFAC yes 66873490
chr5 149697040 149697044 ESR1 TRANSFAC yes 70738384
chr5 149697044 149697054 SREBF1 JASPAR yes 66873491
chr5 149697044 149697054 SREBF1 JASPAR yes 70738385
chr5 149697057 149697076 CTCF JASPAR yes 66873492
chr5 149697057 149697076 CTCF JASPAR yes 70738386
chr5 149697065 149697079 PLAG1 JASPAR yes 66873493
chr5 149697065 149697079 PLAG1 JASPAR yes 70738387
chr5 149697066 149697071 SP1 TRANSFAC yes 66873494
chr5 149697066 149697071 SP1 TRANSFAC yes 70738388
chr5 149697079 149697093 JUN JASPAR yes 66873495
chr5 149697079 149697093 JUN JASPAR yes 70738389
chr5 149697081 149697092 BATF JASPAR yes 66873496
chr5 149697081 149697092 BATF JASPAR yes 70738390
chr5 149697082 149697093 FOSL2 JASPAR yes 66873497
chr5 149697082 149697093 JUNB JASPAR yes 66873498
chr5 149697082 149697093 FOSL2 JASPAR yes 70738391
chr5 149697082 149697093 JUNB JASPAR yes 70738392
chr5 149697083 149697094 FOS JASPAR yes 66873499
chr5 149697083 149697094 FOSL1 JASPAR yes 66873500
chr5 149697083 149697094 JUND JASPAR yes 66873501
chr5 149697083 149697094 FOS JASPAR yes 70738393
chr5 149697083 149697094 FOSL1 JASPAR yes 70738394
chr5 149697083 149697094 JUND JASPAR yes 70738395
chr5 149697084 149697093 JDP2 JASPAR yes 66873502
chr5 149697084 149697093 JDP2 JASPAR yes 70738396
chr5 149697084 149697098 JUN JASPAR yes 66873503
chr5 149697084 149697098 JUN JASPAR yes 70738397
chr5 149697085 149697096 BATF JASPAR yes 66873504
chr5 149697085 149697096 BATF JASPAR yes 70738398
chr5 149697097 149697109 YY1 JASPAR yes 66873505
chr5 149697097 149697109 YY1 JASPAR yes 70738399
chr5 149697111 149697117 ETS1 JASPAR yes 66873506
chr5 149697111 149697117 SPI1 JASPAR yes 66873507
chr5 149697111 149697117 ETS1 JASPAR yes 70738400
chr5 149697111 149697117 SPI1 JASPAR yes 70738401
chr5 149697124 149697131 JUN TRANSFAC yes 66873508
chr5 149697124 149697131 JUN TRANSFAC yes 70738402
chr5 149697145 149697149 LFA1 TRANSFAC yes 66873509
chr5 149697145 149697149 LFA1 TRANSFAC yes 70738403
chr5 149697149 149697164 HSF1 JASPAR yes 66873510
chr5 149697149 149697164 HSF1 JASPAR yes 70738404
chr5 149697150 149697163 HSF4 JASPAR yes 66873511
chr5 149697150 149697163 HSF4 JASPAR yes 70738405
chr5 149697159 149697169 MYF6 JASPAR yes 66873512
chr5 149697159 149697169 MYF6 JASPAR yes 70738406
SNP sites on vista49649[chr5:149696810-149697163]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr5 149696823 rs147922924 C T
EP300 FOS FOSL2 NR3C1 TCF12
8614001
chr5 149696847 rs77381408 T C
EP300 FOS FOSL2 NR3C1 TCF12
8614002
chr5 149696861 rs572084956 G A,T
EBF1 EP300 FOS FOSL2 GLIS3 NR3C1 TCF12 TFAP2A TFAP2B TFAP2C
8614003
chr5 149696870 rs150005534 T C
EP300 ESR2 FOS FOSL2 NR2F1 NR3C1 TCF12
8614004
chr5 149696884 rs13185389 G C
EP300 FOS FOSL1 FOSL2 JUN JUNB JUND NR3C1 RARA TCF12
8614005
chr5 149696919 rs77549947 G A
EP300 FOS FOSL2 JUNB NFE2L2 NR3C1 TCF12
8614006
chr5 149696943 rs76673582 C T
EP300 FOS FOSL2 NR3C1 TCF12
8614007
chr5 149696945 rs566943803 C CCCTG
EP300 FOS FOSL2 NR3C1 TCF12
8614008
chr5 149697083 rs145216466 G A
BATF EP300 FOS FOSL1 FOSL2 JUN JUNB JUND NR3C1 TCF12
8614009
chr5 149697127 rs563501716 G C
EP300 FOS FOSL2 JUN NR3C1 TCF12
8614010
chr5 149697128 rs530835083 A T
EP300 FOS FOSL2 JUN NR3C1 TCF12
8614011
Genes possibly regulated by vista49649[chr5:149696810-149697163]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr5 149599054 149669854 - CAMK2A ENSG00000070808.11 149669854 0.88 0.97 5877 73044
chr5 149675906 149718870 - ARSI ENSG00000183876.8 149718870 0.87 0.91 5878 78293
chr5 149737202 149779871 + TCOF1 ENSG00000070814.13 149737202 0.72 1.0 5879 59961
chr5 149781200 149792492 - CD74 ENSG00000019582.10 149792492 0.87 0.94 5880 4671
Expression level of Genes
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miRNAs possibly regulated by vista49649[chr5:149696810-149697163]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results