EnhancerDB
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  3. rs572084956[chr5:149696861]
Enhancers that have rs572084956[chr5:149696861]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 149691605 149705895 enh22714
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-SH) Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Placenta Colon (HCT116) Peripheral Blood (MM.1S) Adrenal Embryonic Stem Cell Line (H1-hESC) Lung (PC-9) Pancreas Pancreas (Panc1) Muscle (Myotube) Uterus Epithelial (MCF-7)
chr5 149696810 149697163 vista49649
VISTA
Transcript factors that have rs572084956[chr5:149696861]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 149696287 149697163 NR3C1 UCSC Txn Factor no Conserved 108536970
chr5 149696557 149697203 EP300 UCSC Txn Factor no Conserved 108536971
chr5 149696655 149697198 FOSL2 UCSC Txn Factor no Conserved 108536972
chr5 149696753 149697186 FOS UCSC Txn Factor no Conserved 108536973
chr5 149696754 149697157 TCF12 UCSC Txn Factor no Conserved 108536974
chr5 149696849 149696864 TFAP2A JASPAR yes 66873460
chr5 149696849 149696864 TFAP2A JASPAR yes 70738354
chr5 149696850 149696864 EBF1 JASPAR yes 66873461
chr5 149696850 149696864 EBF1 JASPAR yes 70738355
chr5 149696851 149696865 GLIS3 JASPAR yes 66873462
chr5 149696851 149696865 GLIS3 JASPAR yes 70738356
chr5 149696851 149696866 TFAP2C JASPAR yes 66873463
chr5 149696851 149696866 TFAP2C JASPAR yes 70738357
chr5 149696852 149696863 EBF1 JASPAR yes 66873464
chr5 149696852 149696863 EBF1 JASPAR yes 70738358
chr5 149696852 149696864 TFAP2A JASPAR yes 66873465
chr5 149696852 149696864 TFAP2B JASPAR yes 66873466
chr5 149696852 149696864 TFAP2C JASPAR yes 66873467
chr5 149696852 149696864 TFAP2A JASPAR yes 70738359
chr5 149696852 149696864 TFAP2B JASPAR yes 70738360
chr5 149696852 149696864 TFAP2C JASPAR yes 70738361
Genes associated with rs572084956[chr5:149696861], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More