EnhancerDB
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  3. vista5001[chr1:212655370-212655477]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista5001[chr1:212655370-212655477]
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Tissue distribution of vista5001
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Transcription factor that possibly regulate vista5001[chr1:212655370-212655477]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 212655365 212655375 MSC JASPAR yes 35128311
chr1 212655365 212655375 MSC JASPAR yes 118452885
chr1 212655366 212655379 SCRT2 JASPAR yes 35128312
chr1 212655366 212655379 SCRT2 JASPAR yes 118452886
chr1 212655376 212655380 NFE TRANSFAC yes 35128313
chr1 212655376 212655380 NFE TRANSFAC yes 118452887
chr1 212655376 212655389 SMAD2 JASPAR yes 35128314
chr1 212655376 212655389 SMAD2 JASPAR yes 118452888
chr1 212655381 212655393 PKNOX1 JASPAR yes 35128315
chr1 212655381 212655393 PKNOX2 JASPAR yes 35128316
chr1 212655381 212655393 TGIF1 JASPAR yes 35128317
chr1 212655381 212655393 TGIF2 JASPAR yes 35128318
chr1 212655381 212655393 PKNOX1 JASPAR yes 118452889
chr1 212655381 212655393 PKNOX2 JASPAR yes 118452890
chr1 212655381 212655393 TGIF1 JASPAR yes 118452891
chr1 212655381 212655393 TGIF2 JASPAR yes 118452892
chr1 212655393 212655397 H1TF2 TRANSFAC yes 35128319
chr1 212655393 212655397 NFE TRANSFAC yes 35128320
chr1 212655393 212655397 SRF TRANSFAC yes 35128321
chr1 212655393 212655397 H1TF2 TRANSFAC yes 118452893
chr1 212655393 212655397 NFE TRANSFAC yes 118452894
chr1 212655393 212655397 SRF TRANSFAC yes 118452895
chr1 212655395 212655405 HOXA13 JASPAR yes 35128322
chr1 212655395 212655405 HOXB13 JASPAR yes 35128323
chr1 212655395 212655405 HOXD13 JASPAR yes 35128324
chr1 212655395 212655405 HOXA13 JASPAR yes 118452896
chr1 212655395 212655405 HOXB13 JASPAR yes 118452897
chr1 212655395 212655405 HOXD13 JASPAR yes 118452898
chr1 212655401 212655421 PPARG JASPAR yes 35128325
chr1 212655401 212655421 PPARG JASPAR yes 118452899
chr1 212655403 212655418 ESR2 JASPAR yes 35128326
chr1 212655403 212655418 ESR2 JASPAR yes 118452900
chr1 212655404 212655408 LFA1 TRANSFAC yes 35128327
chr1 212655404 212655408 LFA1 TRANSFAC yes 118452901
chr1 212655413 212655423 MAX JASPAR yes 35128328
chr1 212655413 212655423 MAX JASPAR yes 118452902
chr1 212655436 212655446 RUNX3 JASPAR yes 35128329
chr1 212655436 212655446 RUNX3 JASPAR yes 118452903
chr1 212655445 212655466 ZNF263 JASPAR yes 35128330
chr1 212655445 212655466 ZNF263 JASPAR yes 118452904
chr1 212655446 212655461 HNF4G JASPAR yes 35128331
chr1 212655446 212655461 HNF4G JASPAR yes 118452905
chr1 212655447 212655462 HNF4A JASPAR yes 35128332
chr1 212655447 212655462 HNF4A JASPAR yes 118452906
chr1 212655459 212655472 ELF1 JASPAR yes 35128333
chr1 212655459 212655472 ELF1 JASPAR yes 118452907
chr1 212655462 212655469 SPIB JASPAR yes 35128334
chr1 212655462 212655469 SPIB JASPAR yes 118452908
chr1 212655462 212655472 ETV6 JASPAR yes 35128335
chr1 212655462 212655472 ETV6 JASPAR yes 118452909
chr1 212655462 212655473 FLI1 JASPAR yes 35128336
chr1 212655462 212655473 FLI1 JASPAR yes 118452910
chr1 212655463 212655471 EHF JASPAR yes 35128337
chr1 212655463 212655471 EHF JASPAR yes 118452911
chr1 212655464 212655471 SPI1 JASPAR yes 35128338
chr1 212655464 212655471 SPI1 JASPAR yes 118452912
chr1 212655468 212655477 HIC2 JASPAR yes 35128339
chr1 212655468 212655477 HIC2 JASPAR yes 118452913
chr1 212655468 212655478 NFIA JASPAR yes 35128340
chr1 212655468 212655478 NFIA JASPAR yes 118452914
chr1 212655469 212655478 NFIX JASPAR yes 35128341
chr1 212655469 212655478 NFIX JASPAR yes 118452915
chr1 212655470 212655476 NFIC JASPAR yes 35128342
chr1 212655470 212655476 NFIC JASPAR yes 118452916
chr1 212655475 212655485 NKX2-3 JASPAR yes 35128343
chr1 212655475 212655485 NKX2-3 JASPAR yes 118452917
SNP sites on vista5001[chr1:212655370-212655477]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 212655471 rs559965132 T C
EHF ELF1 ETV6 FLI1 HIC2 NFIA NFIC NFIX SPI1
923277
Genes possibly regulated by vista5001[chr1:212655370-212655477]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 212537273 212588243 - TMEM206 ENSG00000065600.8 212588243 0.71 1.0 1826 32873
chr1 212606229 212619714 + NENF ENSG00000117691.5 212606229 0.7 1.0 1827 50859
chr1 212738676 212794119 + ATF3 ENSG00000162772.12 212738676 0.8 1.0 1828 16801
Expression level of Genes
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miRNAs possibly regulated by vista5001[chr1:212655370-212655477]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results