EnhancerDB
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  3. rs559965132[chr1:212655471]
Enhancers that have rs559965132[chr1:212655471]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 212648565 212664795 enh12641
Astrocyte Colon (HCT116) Pancreas Uterus Stomach Epithelial (MCF-7) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1)
chr1 212655370 212655477 vista5001
VISTA
Transcript factors that have rs559965132[chr1:212655471]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 212655217 212656509 ZNF274 GTRD no Cervix (HeLa-S3) 21378808
chr1 212655217 212656509 ZNF274 GTRD no Cervix (HeLa-S3) 107868375
chr1 212655217 212656509 ZNF274 GTRD no Cervix (HeLa-S3) 107868376
chr1 212655271 212656313 ZNF274 GTRD no Cervix (HeLa-S3) 21378809
chr1 212655271 212656313 ZNF274 GTRD no Cervix (HeLa-S3) 107868377
chr1 212655271 212656313 ZNF274 GTRD no Cervix (HeLa-S3) 107868378
chr1 212655428 212655958 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21378810
chr1 212655428 212655958 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107868379
chr1 212655459 212655472 ELF1 JASPAR yes 35128333
chr1 212655459 212655472 ELF1 JASPAR yes 118452907
chr1 212655462 212655472 ETV6 JASPAR yes 35128335
chr1 212655462 212655472 ETV6 JASPAR yes 118452909
chr1 212655462 212655473 FLI1 JASPAR yes 35128336
chr1 212655462 212655473 FLI1 JASPAR yes 118452910
chr1 212655462 212655789 ZNF143 GTRD no Epithelial (MCF-7) 21378811
chr1 212655462 212655789 ZNF143 GTRD no Epithelial (MCF-7) 107868380
chr1 212655463 212655471 EHF JASPAR yes 35128337
chr1 212655463 212655471 EHF JASPAR yes 118452911
chr1 212655464 212655471 SPI1 JASPAR yes 35128338
chr1 212655464 212655471 SPI1 JASPAR yes 118452912
chr1 212655468 212655477 HIC2 JASPAR yes 35128339
chr1 212655468 212655477 HIC2 JASPAR yes 118452913
chr1 212655468 212655478 NFIA JASPAR yes 35128340
chr1 212655468 212655478 NFIA JASPAR yes 118452914
chr1 212655469 212655478 NFIX JASPAR yes 35128341
chr1 212655469 212655478 NFIX JASPAR yes 118452915
chr1 212655470 212655476 NFIC JASPAR yes 35128342
chr1 212655470 212655476 NFIC JASPAR yes 118452916
Genes associated with rs559965132[chr1:212655471], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More