EnhancerDB
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  3. vista5006[chr1:212664582-212665088]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista5006[chr1:212664582-212665088]
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Tissue distribution of vista5006
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Transcription factor that possibly regulate vista5006[chr1:212664582-212665088]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 212664572 212664593 ZNF263 JASPAR yes 35129866
chr1 212664572 212664593 ZNF263 JASPAR yes 118453338
chr1 212664575 212664592 RXRA JASPAR yes 35129867
chr1 212664575 212664592 RXRA JASPAR yes 118453339
chr1 212664582 212664591 SP1 TRANSFAC yes 35129868
chr1 212664582 212664591 SP1 TRANSFAC yes 118453340
chr1 212664583 212664589 SP1 TRANSFAC yes 35129869
chr1 212664583 212664589 SP1 TRANSFAC yes 118453341
chr1 212664583 212664593 SP1 JASPAR yes 35129870
chr1 212664583 212664593 SP1 JASPAR yes 118453342
chr1 212664584 212664591 SP1 TRANSFAC yes 35129871
chr1 212664584 212664591 SP1 TRANSFAC yes 118453343
chr1 212664585 212664590 SP1 TRANSFAC yes 35129872
chr1 212664585 212664590 SP1 TRANSFAC yes 118453344
chr1 212664585 212664591 SP1 TRANSFAC yes 35129873
chr1 212664585 212664591 SP1 TRANSFAC yes 118453345
chr1 212664602 212664620 IRF2 JASPAR yes 35129874
chr1 212664602 212664620 IRF2 JASPAR yes 118453346
chr1 212664603 212664624 IRF1 JASPAR yes 35129875
chr1 212664603 212664624 IRF1 JASPAR yes 118453347
chr1 212664612 212664616 YY1 TRANSFAC yes 35129876
chr1 212664612 212664616 YY1 TRANSFAC yes 118453348
chr1 212664613 212664623 NFATC3 JASPAR yes 35129877
chr1 212664613 212664623 NFATC3 JASPAR yes 118453349
chr1 212664614 212664621 NFATC2 JASPAR yes 35129878
chr1 212664614 212664621 NFATC2 JASPAR yes 118453350
chr1 212664624 212664628 YY1 TRANSFAC yes 35129879
chr1 212664624 212664628 YY1 TRANSFAC yes 118453351
chr1 212664626 212664638 IRF1 JASPAR yes 35129880
chr1 212664626 212664638 IRF1 JASPAR yes 118453352
chr1 212664627 212664645 IRF2 JASPAR yes 35129881
chr1 212664627 212664645 IRF2 JASPAR yes 118453353
chr1 212664628 212664649 IRF1 JASPAR yes 35129882
chr1 212664628 212664649 IRF1 JASPAR yes 118453354
chr1 212664630 212664645 PRDM1 JASPAR yes 35129883
chr1 212664630 212664645 STAT2 JASPAR yes 35129884
chr1 212664630 212664645 PRDM1 JASPAR yes 118453355
chr1 212664630 212664645 STAT2 JASPAR yes 118453356
chr1 212664631 212664645 STAT1 JASPAR yes 35129885
chr1 212664631 212664645 STAT1 JASPAR yes 118453357
chr1 212664632 212664644 IRF1 JASPAR yes 35129886
chr1 212664632 212664644 IRF1 JASPAR yes 118453358
chr1 212664632 212664646 IRF7 JASPAR yes 35129887
chr1 212664632 212664646 IRF8 JASPAR yes 35129888
chr1 212664632 212664646 IRF7 JASPAR yes 118453359
chr1 212664632 212664646 IRF8 JASPAR yes 118453360
chr1 212664632 212664647 IRF9 JASPAR yes 35129889
chr1 212664632 212664647 IRF9 JASPAR yes 118453361
chr1 212664637 212664641 YY1 TRANSFAC yes 35129890
chr1 212664637 212664641 YY1 TRANSFAC yes 118453362
chr1 212664650 212664656 TBP TRANSFAC yes 35129891
chr1 212664650 212664656 TBP TRANSFAC yes 118453363
chr1 212664666 212664677 STAT3 JASPAR yes 35129892
chr1 212664666 212664677 STAT3 JASPAR yes 118453364
chr1 212664677 212664682 GATA2 JASPAR yes 35129893
chr1 212664677 212664682 GATA2 JASPAR yes 118453365
chr1 212664682 212664696 FOXF2 JASPAR yes 35129894
chr1 212664682 212664696 FOXF2 JASPAR yes 118453366
chr1 212664683 212664694 FOXA1 JASPAR yes 35129895
chr1 212664683 212664694 FOXA1 JASPAR yes 118453367
chr1 212664683 212664698 FOXA1 JASPAR yes 35129896
chr1 212664683 212664698 FOXA1 JASPAR yes 118453368
chr1 212664684 212664690 JUN TRANSFAC yes 35129897
chr1 212664684 212664690 JUN TRANSFAC yes 118453369
chr1 212664684 212664695 FOXB1 JASPAR yes 35129898
chr1 212664684 212664695 FOXC1 JASPAR yes 35129899
chr1 212664684 212664695 FOXB1 JASPAR yes 118453370
chr1 212664684 212664695 FOXC1 JASPAR yes 118453371
chr1 212664684 212664696 FOXC2 JASPAR yes 35129900
chr1 212664684 212664696 FOXC2 JASPAR yes 118453372
chr1 212664709 212664717 HOXA5 JASPAR yes 35129901
chr1 212664709 212664717 HOXA5 JASPAR yes 118453373
chr1 212664711 212664721 TEAD4 JASPAR yes 35129902
chr1 212664711 212664721 TEAD4 JASPAR yes 118453374
chr1 212664736 212664757 IRF1 JASPAR yes 35129903
chr1 212664736 212664757 IRF1 JASPAR yes 118453375
chr1 212664741 212664751 GABPA JASPAR yes 35129904
chr1 212664741 212664751 GABPA JASPAR yes 118453376
chr1 212664744 212664749 ETS2 TRANSFAC yes 35129905
chr1 212664744 212664749 ETS2 TRANSFAC yes 118453377
chr1 212664744 212664759 PRDM1 JASPAR yes 35129906
chr1 212664744 212664759 PRDM1 JASPAR yes 118453378
chr1 212664778 212664782 H4TF2 TRANSFAC yes 35129907
chr1 212664778 212664782 H4TF2 TRANSFAC yes 118453379
chr1 212664805 212664809 NFE TRANSFAC yes 118453380
chr1 212664816 212664837 ZNF263 JASPAR yes 118453381
chr1 212664820 212664825 GATA2 JASPAR yes 118453382
chr1 212664843 212664848 NFY TRANSFAC yes 118453383
chr1 212664851 212664856 TFAP2A TRANSFAC yes 118453384
chr1 212664851 212664857 MZF1 JASPAR yes 118453385
chr1 212664870 212664884 SPI1 JASPAR yes 118453386
chr1 212664870 212664884 SPIC JASPAR yes 118453387
chr1 212664871 212664884 ELF1 JASPAR yes 118453388
chr1 212664873 212664884 ELF5 JASPAR yes 118453389
chr1 212664875 212664880 ETS2 TRANSFAC yes 118453390
chr1 212664875 212664883 FEV JASPAR yes 118453391
chr1 212664876 212664883 SPI1 JASPAR yes 118453392
chr1 212664906 212664921 HNF4A JASPAR yes 118453393
chr1 212664907 212664921 NR2F1 JASPAR yes 118453394
chr1 212664907 212664922 HNF4G JASPAR yes 118453395
chr1 212664907 212664922 NR2C2 JASPAR yes 118453396
chr1 212664917 212664921 YY1 TRANSFAC yes 118453397
chr1 212664928 212664941 NR2F1 JASPAR yes 35129908
chr1 212664928 212664941 NR2F1 JASPAR yes 118453398
chr1 212664930 212664941 ESRRA JASPAR yes 35129909
chr1 212664930 212664941 ESRRB JASPAR yes 35129910
chr1 212664930 212664941 ESRRA JASPAR yes 118453399
chr1 212664930 212664941 ESRRB JASPAR yes 118453400
chr1 212664953 212664971 IRF2 JASPAR yes 35129911
chr1 212664953 212664971 IRF2 JASPAR yes 118453401
chr1 212664954 212664975 IRF1 JASPAR yes 35129912
chr1 212664954 212664975 IRF1 JASPAR yes 118453402
chr1 212664956 212664971 STAT2 JASPAR yes 35129913
chr1 212664956 212664971 STAT2 JASPAR yes 118453403
chr1 212664957 212664971 STAT1 JASPAR yes 35129914
chr1 212664957 212664971 STAT1 JASPAR yes 118453404
chr1 212664958 212664970 IRF1 JASPAR yes 35129915
chr1 212664958 212664970 IRF1 JASPAR yes 118453405
chr1 212664958 212664972 IRF7 JASPAR yes 35129916
chr1 212664958 212664972 IRF7 JASPAR yes 118453406
chr1 212664958 212664973 IRF9 JASPAR yes 35129917
chr1 212664958 212664973 IRF9 JASPAR yes 118453407
chr1 212664960 212664966 TCF4 TRANSFAC yes 35129918
chr1 212664960 212664966 TCF4 TRANSFAC yes 118453408
chr1 212664960 212664975 FOXP1 JASPAR yes 35129919
chr1 212664960 212664975 FOXP1 JASPAR yes 118453409
chr1 212664961 212664970 SRY JASPAR yes 35129920
chr1 212664961 212664970 SRY JASPAR yes 118453410
chr1 212664961 212664972 FOXP2 JASPAR yes 35129921
chr1 212664961 212664972 FOXP2 JASPAR yes 118453411
chr1 212664961 212664973 FOXC2 JASPAR yes 35129922
chr1 212664961 212664973 FOXC2 JASPAR yes 118453412
chr1 212664963 212664971 FOXO3 JASPAR yes 35129923
chr1 212664963 212664971 FOXO3 JASPAR yes 118453413
chr1 212664966 212664982 SRF JASPAR yes 35129924
chr1 212664966 212664982 SRF JASPAR yes 118453414
chr1 212664967 212664972 ETS2 TRANSFAC yes 35129925
chr1 212664967 212664972 ETS2 TRANSFAC yes 118453415
chr1 212664974 212664979 GATA2 JASPAR yes 35129926
chr1 212664974 212664979 GATA2 JASPAR yes 118453416
chr1 212664978 212664993 STAT2 JASPAR yes 35129927
chr1 212664978 212664993 STAT2 JASPAR yes 118453417
chr1 212664980 212665001 IRF1 JASPAR yes 35129928
chr1 212664980 212665001 IRF1 JASPAR yes 118453418
chr1 212664982 212664997 IRF9 JASPAR yes 35129929
chr1 212664982 212664997 IRF9 JASPAR yes 118453419
chr1 212664984 212664998 STAT1 JASPAR yes 35129930
chr1 212664984 212664998 STAT1 JASPAR yes 118453420
chr1 212664984 212664999 STAT2 JASPAR yes 35129931
chr1 212664984 212664999 STAT2 JASPAR yes 118453421
chr1 212664984 212665002 IRF2 JASPAR yes 35129932
chr1 212664984 212665002 IRF2 JASPAR yes 118453422
chr1 212664985 212664997 IRF1 JASPAR yes 35129933
chr1 212664985 212664997 IRF1 JASPAR yes 118453423
chr1 212664985 212665001 SOX4 JASPAR yes 35129934
chr1 212664985 212665001 SOX4 JASPAR yes 118453424
chr1 212665016 212665019 MYB TRANSFAC yes 35129935
chr1 212665016 212665019 MYB TRANSFAC yes 118453425
chr1 212665024 212665035 NFKB1 JASPAR yes 35129936
chr1 212665024 212665035 NFKB1 JASPAR yes 118453426
chr1 212665031 212665037 SP1 TRANSFAC yes 35129937
chr1 212665031 212665037 SP1 TRANSFAC yes 118453427
chr1 212665031 212665041 SP1 JASPAR yes 35129938
chr1 212665031 212665041 SP1 JASPAR yes 118453428
chr1 212665033 212665043 ZNF740 JASPAR yes 35129939
chr1 212665033 212665043 ZNF740 JASPAR yes 118453429
chr1 212665043 212665047 NFE TRANSFAC yes 35129940
chr1 212665043 212665047 NFE TRANSFAC yes 118453430
chr1 212665044 212665049 GATA2 JASPAR yes 35129941
chr1 212665044 212665049 GATA2 JASPAR yes 118453431
chr1 212665044 212665060 ZNF143 JASPAR yes 35129942
chr1 212665044 212665060 ZNF143 JASPAR yes 118453432
chr1 212665052 212665063 CDX2 JASPAR yes 35129943
chr1 212665052 212665063 CDX2 JASPAR yes 118453433
chr1 212665053 212665064 HOXA10 JASPAR yes 35129944
chr1 212665053 212665064 HOXA10 JASPAR yes 118453434
chr1 212665054 212665063 CDX1 JASPAR yes 35129945
chr1 212665054 212665063 CDX1 JASPAR yes 118453435
SNP sites on vista5006[chr1:212664582-212665088]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 212664696 rs554268251 GAT G
FOXA1 FOXC2 FOXF2
923390
chr1 212664733 rs12030310 T C no 923391
chr1 212664828 rs192753947 C G
ZNF263
923392
chr1 212664843 rs6670186 A T
NFY
923393
chr1 212664844 rs6681329 G C
NFY
923394
chr1 212664874 rs79094392 A G
ELF1 ELF5 SPI1 SPIC
923395
chr1 212664969 rs13374672 T G
ETS2 FOXC2 FOXO3 FOXP1 FOXP2 IRF1 IRF2 IRF7 IRF9 SRF SRY STAT1 STAT2
923396
chr1 212665043 rs79182305 C T
NFE ZNF740
923397
chr1 212665054 rs4951450 T C
CDX1 CDX2 HOXA10 ZNF143
923398
Genes possibly regulated by vista5006[chr1:212664582-212665088]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 212537273 212588243 - TMEM206 ENSG00000065600.8 212588243 0.71 1.0 1826 23661
chr1 212606229 212619714 + NENF ENSG00000117691.5 212606229 0.7 1.0 1827 41647
chr1 212738676 212794119 + ATF3 ENSG00000162772.12 212738676 0.8 1.0 1828 26412
Expression level of Genes
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miRNAs possibly regulated by vista5006[chr1:212664582-212665088]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results