EnhancerDB
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  3. rs554268251[chr1:212664696]
Enhancers that have rs554268251[chr1:212664696]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 212648565 212664795 enh12641
Astrocyte Colon (HCT116) Pancreas Uterus Stomach Epithelial (MCF-7) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1)
chr1 212664582 212665088 vista5006
VISTA
Transcript factors that have rs554268251[chr1:212664696]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 212664160 212666123 ZNF274 GTRD no Bone Marrow (K562) 107868583
chr1 212664387 212666081 ZNF274 GTRD no Cervix (HeLa-S3) 21378915
chr1 212664387 212666081 ZNF274 GTRD no Cervix (HeLa-S3) 107868584
chr1 212664438 212665787 ZNF274 GTRD no Bone Marrow (K562) 107868585
chr1 212664505 212665980 ZNF274 GTRD no Cervix (HeLa-S3) 21378916
chr1 212664505 212665980 ZNF274 GTRD no Cervix (HeLa-S3) 107868586
chr1 212664584 212665589 TEF1 GTRD no Bone (Osteoblast) 21378917
chr1 212664584 212665589 TEF1 GTRD no Bone (Osteoblast) 107868587
chr1 212664614 212666390 ZNF274 GTRD no Bone Marrow (K562) 107868588
chr1 212664639 212666127 ZNF274 GTRD no Bone Marrow (K562) 107868589
chr1 212664682 212664696 FOXF2 JASPAR yes 35129894
chr1 212664682 212664696 FOXF2 JASPAR yes 118453366
chr1 212664683 212664698 FOXA1 JASPAR yes 35129896
chr1 212664683 212664698 FOXA1 JASPAR yes 118453368
chr1 212664684 212664696 FOXC2 JASPAR yes 35129900
chr1 212664684 212664696 FOXC2 JASPAR yes 118453372
Genes associated with rs554268251[chr1:212664696], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More