EnhancerDB
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  3. vista50120[chr5:171540284-171540310]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista50120[chr5:171540284-171540310]
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Tissue distribution of vista50120
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Transcription factor that possibly regulate vista50120[chr5:171540284-171540310]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr5 171540040 171540361 RUNX3 UCSC Txn Factor no Conserved 108537427
chr5 171540071 171540387 EBF1 UCSC Txn Factor no Conserved 108537428
SNP sites on vista50120[chr5:171540284-171540310]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr5 171540308 rs149117224 G A
EBF1 RUNX3
8698283
Genes possibly regulated by vista50120[chr5:171540284-171540310]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr5 171469077 171615390 - STK10 ENSG00000072786.8 171615390 0.85 1.0 5979 24920
chr5 171621176 171630456 + EFCAB9 ENSG00000214360.4 171621176 0.98 0.94 5980 19134
Expression level of Genes
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miRNAs possibly regulated by vista50120[chr5:171540284-171540310]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results