EnhancerDB
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  3. rs149117224[chr5:171540308]
Enhancers that have rs149117224[chr5:171540308]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 171526400 171541439 enh8877
Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Breast Muscle (Myoblast) Prostate (RWPE1) Lung Heart
chr5 171540284 171540310 vista50120
VISTA
Transcript factors that have rs149117224[chr5:171540308]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 171540040 171540361 RUNX3 UCSC Txn Factor no Conserved 108537427
chr5 171540071 171540387 EBF1 UCSC Txn Factor no Conserved 108537428
Genes associated with rs149117224[chr5:171540308], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More