EnhancerDB
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  3. vista50129[chr5:171601698-171602038]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista50129[chr5:171601698-171602038]
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Tissue distribution of vista50129
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Transcription factor that possibly regulate vista50129[chr5:171601698-171602038]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr5 171601469 171602071 POLR2A UCSC Txn Factor no Conserved 108537432
chr5 171601533 171601977 TAF1 UCSC Txn Factor no Conserved 108537433
chr5 171601727 171602030 USF2 UCSC Txn Factor no Conserved 108537434
chr5 171601758 171602028 USF1 UCSC Txn Factor no Conserved 108537435
chr5 171601704 171601711 CEBPA TRANSFAC yes 67771518
chr5 171601704 171601711 CEBPA TRANSFAC yes 70760822
chr5 171601705 171601716 E2F6 JASPAR yes 67771519
chr5 171601705 171601716 E2F6 JASPAR yes 70760823
chr5 171601756 171601771 SCRT1 JASPAR yes 67771520
chr5 171601756 171601771 SCRT1 JASPAR yes 70760824
chr5 171601793 171601808 SOX21 JASPAR yes 67771521
chr5 171601793 171601808 SOX21 JASPAR yes 70760825
chr5 171601805 171601809 H4TF2 TRANSFAC yes 67771522
chr5 171601805 171601809 H4TF2 TRANSFAC yes 70760826
chr5 171601805 171601815 ELK1 JASPAR yes 67771523
chr5 171601805 171601815 ELK1 JASPAR yes 70760827
chr5 171601807 171601816 ELK4 JASPAR yes 67771524
chr5 171601807 171601816 ELK4 JASPAR yes 70760828
chr5 171601807 171601817 ELK1 JASPAR yes 67771525
chr5 171601807 171601817 ELK3 JASPAR yes 67771526
chr5 171601807 171601817 ERG JASPAR yes 67771527
chr5 171601807 171601817 ETV1 JASPAR yes 67771528
chr5 171601807 171601817 ETV4 JASPAR yes 67771529
chr5 171601807 171601817 ETV5 JASPAR yes 67771530
chr5 171601807 171601817 FEV JASPAR yes 67771531
chr5 171601807 171601817 FLI1 JASPAR yes 67771532
chr5 171601807 171601817 ELK1 JASPAR yes 70760829
chr5 171601807 171601817 ELK3 JASPAR yes 70760830
chr5 171601807 171601817 ERG JASPAR yes 70760831
chr5 171601807 171601817 ETV1 JASPAR yes 70760832
chr5 171601807 171601817 ETV4 JASPAR yes 70760833
chr5 171601807 171601817 ETV5 JASPAR yes 70760834
chr5 171601807 171601817 FEV JASPAR yes 70760835
chr5 171601807 171601817 FLI1 JASPAR yes 70760836
chr5 171601807 171601818 ELK4 JASPAR yes 67771533
chr5 171601807 171601818 ELK4 JASPAR yes 70760837
chr5 171601809 171601815 ETS1 JASPAR yes 67771534
chr5 171601809 171601815 SPI1 JASPAR yes 67771535
chr5 171601809 171601815 ETS1 JASPAR yes 70760838
chr5 171601809 171601815 SPI1 JASPAR yes 70760839
chr5 171601862 171601883 ZNF263 JASPAR yes 67771536
chr5 171601862 171601883 ZNF263 JASPAR yes 70760840
chr5 171601877 171601887 SREBF2 JASPAR yes 67771537
chr5 171601877 171601887 SREBF2 JASPAR yes 70760841
chr5 171601877 171601888 USF1 JASPAR yes 67771538
chr5 171601877 171601888 USF1 JASPAR yes 70760842
chr5 171601879 171601884 USF2 TRANSFAC yes 67771539
chr5 171601879 171601884 USF2 TRANSFAC yes 70760843
chr5 171601903 171601906 MYB TRANSFAC yes 67771540
chr5 171601903 171601906 MYB TRANSFAC yes 70760844
chr5 171601928 171601938 NFKB1 JASPAR yes 67771541
chr5 171601928 171601938 NFKB1 JASPAR yes 70760845
chr5 171601935 171601956 ZNF263 JASPAR yes 67771542
chr5 171601935 171601956 ZNF263 JASPAR yes 70760846
chr5 171601938 171601959 ZNF263 JASPAR yes 67771543
chr5 171601938 171601959 ZNF263 JASPAR yes 70760847
chr5 171601941 171601962 ZNF263 JASPAR yes 67771544
chr5 171601941 171601962 ZNF263 JASPAR yes 70760848
chr5 171601944 171601950 MZF1 JASPAR yes 67771545
chr5 171601944 171601950 MZF1 JASPAR yes 70760849
chr5 171601952 171601964 E2F8 JASPAR yes 67771546
chr5 171601952 171601964 E2F8 JASPAR yes 70760850
chr5 171601956 171601962 MZF1 JASPAR yes 67771547
chr5 171601956 171601962 MZF1 JASPAR yes 70760851
chr5 171601970 171601985 MEF2A JASPAR yes 67771548
chr5 171601970 171601985 MEF2A JASPAR yes 70760852
chr5 171601971 171601986 MEF2C JASPAR yes 67771549
chr5 171601971 171601986 MEF2C JASPAR yes 70760853
chr5 171601992 171602010 TP63 JASPAR yes 67771550
chr5 171601992 171602010 TP63 JASPAR yes 70760854
chr5 171601995 171602010 FOXP1 JASPAR yes 67771551
chr5 171601995 171602010 FOXP1 JASPAR yes 70760855
chr5 171602015 171602023 FOXO3 JASPAR yes 67771552
chr5 171602015 171602023 FOXO3 JASPAR yes 70760856
SNP sites on vista50129[chr5:171601698-171602038]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr5 171601730 rs141578105 G A
POLR2A TAF1 USF2
8699142
chr5 171601795 rs147058830 G A
POLR2A SOX21 TAF1 USF1 USF2
8699143
chr5 171601856 rs191046518 C G
POLR2A TAF1 USF1 USF2
8699144
chr5 171602010 rs556878423 T C
FOXP1 POLR2A TP63 USF1 USF2
8699145
Genes possibly regulated by vista50129[chr5:171601698-171602038]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr5 171469077 171615390 - STK10 ENSG00000072786.8 171615390 0.85 1.0 5979 86648
chr5 171621176 171630456 + EFCAB9 ENSG00000214360.4 171621176 0.98 0.94 5980 80862
Expression level of Genes
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miRNAs possibly regulated by vista50129[chr5:171601698-171602038]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results