EnhancerDB
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  3. rs556878423[chr5:171602010]
Enhancers that have rs556878423[chr5:171602010]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 171565199 171613524 enh8878
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Large Intestine Esophagus Blood (GM12878) Placenta Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Heart
chr5 171601698 171602038 vista50129
VISTA
Transcript factors that have rs556878423[chr5:171602010]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 171601469 171602071 POLR2A UCSC Txn Factor no Conserved 108537432
chr5 171601727 171602030 USF2 UCSC Txn Factor no Conserved 108537434
chr5 171601758 171602028 USF1 UCSC Txn Factor no Conserved 108537435
chr5 171601992 171602010 TP63 JASPAR yes 67771550
chr5 171601992 171602010 TP63 JASPAR yes 70760854
chr5 171601995 171602010 FOXP1 JASPAR yes 67771551
chr5 171601995 171602010 FOXP1 JASPAR yes 70760855
Genes associated with rs556878423[chr5:171602010], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More