EnhancerDB
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  3. vista50143[chr5:171838601-171839062]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista50143[chr5:171838601-171839062]
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Tissue distribution of vista50143
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Transcription factor that possibly regulate vista50143[chr5:171838601-171839062]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr5 171838594 171838614 TP53 JASPAR yes 67786571
chr5 171838594 171838614 TP53 JASPAR yes 70761414
chr5 171838648 171838653 SP1 TRANSFAC yes 67786572
chr5 171838648 171838653 SP1 TRANSFAC yes 70761415
chr5 171838648 171838654 SP1 TRANSFAC yes 67786573
chr5 171838648 171838654 SP1 TRANSFAC yes 70761416
chr5 171838651 171838661 SP1 JASPAR yes 67786574
chr5 171838651 171838661 SP1 JASPAR yes 70761417
chr5 171838680 171838691 EBF1 JASPAR yes 67786575
chr5 171838680 171838691 EBF1 JASPAR yes 70761418
chr5 171838684 171838689 TFAP2A TRANSFAC yes 67786576
chr5 171838684 171838689 TFAP2A TRANSFAC yes 70761419
chr5 171838684 171838690 MZF1 JASPAR yes 67786577
chr5 171838684 171838690 MZF1 JASPAR yes 70761420
chr5 171838692 171838704 TAL1 JASPAR yes 67786578
chr5 171838692 171838704 TAL1 JASPAR yes 70761421
chr5 171838709 171838719 NFKB1 JASPAR yes 67786579
chr5 171838709 171838719 NFKB1 JASPAR yes 70761422
chr5 171838731 171838740 THAP1 JASPAR yes 67786580
chr5 171838731 171838740 THAP1 JASPAR yes 70761423
chr5 171838739 171838744 MYB TRANSFAC yes 67786581
chr5 171838739 171838744 MYB TRANSFAC yes 70761424
chr5 171838740 171838754 POU4F1 JASPAR yes 67786582
chr5 171838740 171838754 POU4F1 JASPAR yes 70761425
chr5 171838743 171838756 POU3F3 JASPAR yes 67786583
chr5 171838743 171838756 POU3F3 JASPAR yes 70761426
chr5 171838747 171838762 MEF2C JASPAR yes 67786584
chr5 171838747 171838762 MEF2C JASPAR yes 70761427
chr5 171838750 171838754 YY1 TRANSFAC yes 67786585
chr5 171838750 171838754 YY1 TRANSFAC yes 70761428
chr5 171838750 171838761 CEBPA JASPAR yes 67786586
chr5 171838750 171838761 CEBPA JASPAR yes 70761429
chr5 171838762 171838766 YY1 TRANSFAC yes 67786587
chr5 171838762 171838766 YY1 TRANSFAC yes 70761430
chr5 171838766 171838771 TFAP2A TRANSFAC yes 67786588
chr5 171838766 171838771 TFAP2A TRANSFAC yes 70761431
chr5 171838766 171838772 MZF1 JASPAR yes 67786589
chr5 171838766 171838772 MZF1 JASPAR yes 70761432
chr5 171838769 171838774 GATA2 JASPAR yes 67786590
chr5 171838769 171838774 GATA2 JASPAR yes 70761433
chr5 171838772 171838775 MYB TRANSFAC yes 67786591
chr5 171838772 171838775 MYB TRANSFAC yes 70761434
chr5 171838791 171838806 RUNX2 JASPAR yes 67786592
chr5 171838791 171838806 RUNX2 JASPAR yes 70761435
chr5 171838795 171838805 RUNX3 JASPAR yes 67786593
chr5 171838795 171838805 RUNX3 JASPAR yes 70761436
chr5 171838796 171838805 RUNX2 JASPAR yes 67786594
chr5 171838796 171838805 RUNX2 JASPAR yes 70761437
chr5 171838796 171838817 IRF1 JASPAR yes 67786595
chr5 171838796 171838817 IRF1 JASPAR yes 70761438
chr5 171838798 171838813 STAT2 JASPAR yes 67786596
chr5 171838798 171838813 STAT2 JASPAR yes 70761439
chr5 171838802 171838817 FOXP1 JASPAR yes 67786597
chr5 171838802 171838817 FOXP1 JASPAR yes 70761440
chr5 171838847 171838851 YY1 TRANSFAC yes 67786598
chr5 171838847 171838851 YY1 TRANSFAC yes 70761441
chr5 171838891 171838911 TBX19 JASPAR yes 67786599
chr5 171838891 171838911 TBX19 JASPAR yes 70761442
chr5 171838901 171838912 FOXA1 JASPAR yes 67786600
chr5 171838901 171838912 FOXA1 JASPAR yes 70761443
chr5 171838901 171838916 FOXA1 JASPAR yes 67786601
chr5 171838901 171838916 FOXA1 JASPAR yes 70761444
chr5 171838902 171838913 FOXB1 JASPAR yes 67786602
chr5 171838902 171838913 FOXC1 JASPAR yes 67786603
chr5 171838902 171838913 FOXB1 JASPAR yes 70761445
chr5 171838902 171838913 FOXC1 JASPAR yes 70761446
chr5 171838902 171838914 FOXC2 JASPAR yes 67786604
chr5 171838902 171838914 FOXC2 JASPAR yes 70761447
chr5 171838903 171838914 FOXP2 JASPAR yes 67786605
chr5 171838903 171838914 FOXP2 JASPAR yes 70761448
chr5 171838904 171838912 FOXO3 JASPAR yes 67786606
chr5 171838904 171838912 FOXO3 JASPAR yes 70761449
chr5 171838905 171838912 FOXD2 JASPAR yes 67786607
chr5 171838905 171838912 FOXI1 JASPAR yes 67786608
chr5 171838905 171838912 FOXL1 JASPAR yes 67786609
chr5 171838905 171838912 FOXO4 JASPAR yes 67786610
chr5 171838905 171838912 FOXO6 JASPAR yes 67786611
chr5 171838905 171838912 FOXP3 JASPAR yes 67786612
chr5 171838905 171838912 FOXD2 JASPAR yes 70761450
chr5 171838905 171838912 FOXI1 JASPAR yes 70761451
chr5 171838905 171838912 FOXL1 JASPAR yes 70761452
chr5 171838905 171838912 FOXO4 JASPAR yes 70761453
chr5 171838905 171838912 FOXO6 JASPAR yes 70761454
chr5 171838905 171838912 FOXP3 JASPAR yes 70761455
chr5 171838905 171838913 FOXD1 JASPAR yes 67786613
chr5 171838905 171838913 FOXG1 JASPAR yes 67786614
chr5 171838905 171838913 FOXO3 JASPAR yes 67786615
chr5 171838905 171838913 FOXD1 JASPAR yes 70761456
chr5 171838905 171838913 FOXG1 JASPAR yes 70761457
chr5 171838905 171838913 FOXO3 JASPAR yes 70761458
chr5 171838943 171838964 IRF1 JASPAR yes 67786616
chr5 171838943 171838964 IRF1 JASPAR yes 70761459
chr5 171838945 171838960 IRF9 JASPAR yes 67786617
chr5 171838945 171838960 IRF9 JASPAR yes 70761460
chr5 171838946 171838960 IRF7 JASPAR yes 67786618
chr5 171838946 171838960 IRF8 JASPAR yes 67786619
chr5 171838946 171838960 IRF7 JASPAR yes 70761461
chr5 171838946 171838960 IRF8 JASPAR yes 70761462
chr5 171838947 171838961 STAT1 JASPAR yes 67786620
chr5 171838947 171838961 STAT1 JASPAR yes 70761463
chr5 171838947 171838962 STAT2 JASPAR yes 67786621
chr5 171838947 171838962 STAT2 JASPAR yes 70761464
chr5 171838947 171838965 IRF2 JASPAR yes 67786622
chr5 171838947 171838965 IRF2 JASPAR yes 70761465
chr5 171838948 171838960 IRF1 JASPAR yes 67786623
chr5 171838948 171838960 IRF1 JASPAR yes 70761466
chr5 171838948 171838964 SOX4 JASPAR yes 67786624
chr5 171838948 171838964 SOX4 JASPAR yes 70761467
chr5 171838963 171838984 ZNF263 JASPAR yes 67786625
chr5 171838963 171838984 ZNF263 JASPAR yes 70761468
chr5 171838967 171838977 SP1 JASPAR yes 67786626
chr5 171838967 171838977 SP1 JASPAR yes 70761469
chr5 171838968 171838978 SP1 JASPAR yes 67786627
chr5 171838968 171838978 SP1 JASPAR yes 70761470
chr5 171838971 171838982 E2F6 JASPAR yes 67786628
chr5 171838971 171838982 E2F6 JASPAR yes 70761471
chr5 171838974 171838984 SP1 JASPAR yes 67786629
chr5 171838974 171838984 SP1 JASPAR yes 70761472
chr5 171838974 171838989 ZIC3 JASPAR yes 67786630
chr5 171838974 171838989 ZIC3 JASPAR yes 70761473
chr5 171838975 171838990 TFAP2C JASPAR yes 67786631
chr5 171838975 171838990 TFAP2C JASPAR yes 70761474
chr5 171838978 171838989 EBF1 JASPAR yes 67786632
chr5 171838978 171838989 EBF1 JASPAR yes 70761475
chr5 171838978 171838992 PLAG1 JASPAR yes 67786633
chr5 171838978 171838992 PLAG1 JASPAR yes 70761476
chr5 171838984 171839003 RFX2 JASPAR yes 67786634
chr5 171838984 171839003 RFX2 JASPAR yes 70761477
chr5 171838986 171839001 RFX5 JASPAR yes 67786635
chr5 171838986 171839001 RFX5 JASPAR yes 70761478
chr5 171839045 171839049 H1TF2 TRANSFAC yes 67786636
chr5 171839045 171839049 NFE TRANSFAC yes 67786637
chr5 171839045 171839049 SRF TRANSFAC yes 67786638
chr5 171839045 171839049 H1TF2 TRANSFAC yes 70761479
chr5 171839045 171839049 NFE TRANSFAC yes 70761480
chr5 171839045 171839049 SRF TRANSFAC yes 70761481
chr5 171839048 171839057 NKX3-2 JASPAR yes 67786639
chr5 171839048 171839057 NKX3-2 JASPAR yes 70761482
chr5 171839052 171839058 ZNF354C JASPAR yes 67786640
chr5 171839052 171839058 ZNF354C JASPAR yes 70761483
chr5 171839061 171839079 NR3C1 JASPAR yes 67786641
chr5 171839061 171839079 NR3C1 JASPAR yes 70761484
SNP sites on vista50143[chr5:171838601-171839062]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr5 171838719 rs4867674 C T
NFKB1
8700697
chr5 171838755 rs145089174 T C
CEBPA MEF2C POU3F3
8700698
chr5 171838770 rs533180165 G T
GATA2 MZF1 TFAP2A
8700699
chr5 171838814 rs546759421 T A
FOXP1 IRF1
8700700
chr5 171838819 rs72846962 G A,T no 8700701
chr5 171838865 rs4868168 G A no 8700702
chr5 171838925 rs190186795 A G no 8700703
chr5 171838936 rs79404810 C T no 8700704
chr5 171839013 rs369906150 C T no 8700705
chr5 171839034 rs7726054 C T no 8700706
Genes possibly regulated by vista50143[chr5:171838601-171839062]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr5 171752185 171881527 - SH3PXD2B ENSG00000174705.7 171881527 0.73 1.0 5982 57535
Expression level of Genes
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miRNAs possibly regulated by vista50143[chr5:171838601-171839062]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results