EnhancerDB
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  3. rs533180165[chr5:171838770]
Enhancers that have rs533180165[chr5:171838770]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 171823725 171849015 enh22806
Brain (SK-N-MC) Astrocyte Adrenal Pancreas Uterus Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
chr5 171838601 171839062 vista50143
VISTA
Transcript factors that have rs533180165[chr5:171838770]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 171838766 171838771 TFAP2A TRANSFAC yes 67786588
chr5 171838766 171838771 TFAP2A TRANSFAC yes 70761431
chr5 171838766 171838772 MZF1 JASPAR yes 67786589
chr5 171838766 171838772 MZF1 JASPAR yes 70761432
chr5 171838769 171838774 GATA2 JASPAR yes 67786590
chr5 171838769 171838774 GATA2 JASPAR yes 70761433
Genes associated with rs533180165[chr5:171838770], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More