EnhancerDB
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  3. vista50170[chr5:172209593-172209865]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista50170[chr5:172209593-172209865]
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Tissue distribution of vista50170
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Transcription factor that possibly regulate vista50170[chr5:172209593-172209865]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr5 172209592 172210082 EP300 UCSC Txn Factor no Conserved 108537496
chr5 172209609 172209894 FOXA1 UCSC Txn Factor no Conserved 108537497
chr5 172209618 172210046 TCF12 UCSC Txn Factor no Conserved 108537498
chr5 172209626 172209893 FOSL2 UCSC Txn Factor no Conserved 108537499
chr5 172209640 172209870 FOXA2 UCSC Txn Factor no Conserved 108537500
chr5 172209699 172209845 JUND UCSC Txn Factor no Conserved 108537501
chr5 172209737 172210047 NR3C1 UCSC Txn Factor no Conserved 108537502
chr5 172209604 172209613 SNAI2 JASPAR yes 67826040
chr5 172209604 172209613 SNAI2 JASPAR yes 70763131
chr5 172209604 172209614 TCF3 JASPAR yes 67826041
chr5 172209604 172209614 TCF4 JASPAR yes 67826042
chr5 172209604 172209614 TCF3 JASPAR yes 70763132
chr5 172209604 172209614 TCF4 JASPAR yes 70763133
chr5 172209606 172209615 ZEB1 JASPAR yes 67826043
chr5 172209606 172209615 ZEB1 JASPAR yes 70763134
chr5 172209607 172209615 TBX15 JASPAR yes 67826044
chr5 172209607 172209615 TBX15 JASPAR yes 70763135
chr5 172209608 172209613 SP1 TRANSFAC yes 67826045
chr5 172209608 172209613 SP1 TRANSFAC yes 70763136
chr5 172209616 172209620 TEAD2 TRANSFAC yes 67826046
chr5 172209616 172209620 TEAD2 TRANSFAC yes 70763137
chr5 172209616 172209621 TBP TRANSFAC yes 67826047
chr5 172209616 172209621 TBP TRANSFAC yes 70763138
chr5 172209618 172209627 NKX3-2 JASPAR yes 67826048
chr5 172209618 172209627 NKX3-2 JASPAR yes 70763139
chr5 172209637 172209644 NFATC2 JASPAR yes 67826049
chr5 172209637 172209644 NFATC2 JASPAR yes 70763140
chr5 172209638 172209646 FOXO3 JASPAR yes 67826050
chr5 172209638 172209646 FOXO3 JASPAR yes 70763141
chr5 172209668 172209676 FOXL1 JASPAR yes 67826051
chr5 172209668 172209676 FOXL1 JASPAR yes 70763142
chr5 172209675 172209689 POU1F1 JASPAR yes 67826052
chr5 172209675 172209689 POU1F1 JASPAR yes 70763143
chr5 172209676 172209688 POU3F1 JASPAR yes 67826053
chr5 172209676 172209688 POU3F2 JASPAR yes 67826054
chr5 172209676 172209688 POU3F1 JASPAR yes 70763144
chr5 172209676 172209688 POU3F2 JASPAR yes 70763145
chr5 172209676 172209689 POU3F3 JASPAR yes 67826055
chr5 172209676 172209689 POU3F3 JASPAR yes 70763146
chr5 172209677 172209689 POU2F1 JASPAR yes 67826056
chr5 172209677 172209689 POU2F1 JASPAR yes 70763147
chr5 172209678 172209687 POU3F4 JASPAR yes 67826057
chr5 172209678 172209687 POU5F1B JASPAR yes 67826058
chr5 172209678 172209687 POU3F4 JASPAR yes 70763148
chr5 172209678 172209687 POU5F1B JASPAR yes 70763149
chr5 172209681 172209692 USF1 JASPAR yes 67826059
chr5 172209681 172209692 USF1 JASPAR yes 70763150
chr5 172209686 172209697 NFE2L2 JASPAR yes 67826060
chr5 172209686 172209697 NFE2L2 JASPAR yes 70763151
chr5 172209702 172209716 EBF1 JASPAR yes 67826061
chr5 172209702 172209716 EBF1 JASPAR yes 70763152
chr5 172209711 172209716 GATA1 TRANSFAC yes 67826062
chr5 172209711 172209716 GATA1 TRANSFAC yes 70763153
chr5 172209723 172209737 STAT1 JASPAR yes 67826063
chr5 172209723 172209737 STAT1 JASPAR yes 70763154
chr5 172209724 172209730 HiNF-A TRANSFAC yes 67826064
chr5 172209724 172209730 HiNF-A TRANSFAC yes 70763155
chr5 172209724 172209736 IRF1 JASPAR yes 67826065
chr5 172209724 172209736 IRF1 JASPAR yes 70763156
chr5 172209724 172209739 STAT2 JASPAR yes 67826066
chr5 172209724 172209739 STAT2 JASPAR yes 70763157
chr5 172209725 172209740 FOXP1 JASPAR yes 67826067
chr5 172209725 172209740 FOXP1 JASPAR yes 70763158
chr5 172209726 172209737 FOXA1 JASPAR yes 67826068
chr5 172209726 172209737 FOXA1 JASPAR yes 70763159
chr5 172209728 172209739 FOXP2 JASPAR yes 67826069
chr5 172209728 172209739 FOXP2 JASPAR yes 70763160
chr5 172209729 172209737 FOXO3 JASPAR yes 67826070
chr5 172209729 172209737 FOXO3 JASPAR yes 70763161
chr5 172209731 172209743 GRHL1 JASPAR yes 67826071
chr5 172209731 172209743 GRHL1 JASPAR yes 70763162
chr5 172209740 172209755 FOXP1 JASPAR yes 67826072
chr5 172209740 172209755 FOXP1 JASPAR yes 70763163
chr5 172209741 172209752 FOXA1 JASPAR yes 67826073
chr5 172209741 172209752 FOXA1 JASPAR yes 70763164
chr5 172209741 172209756 FOXA1 JASPAR yes 67826074
chr5 172209741 172209756 FOXA1 JASPAR yes 70763165
chr5 172209742 172209754 FOXC2 JASPAR yes 67826075
chr5 172209742 172209754 FOXC2 JASPAR yes 70763166
chr5 172209749 172209755 SOX10 JASPAR yes 67826076
chr5 172209749 172209755 SOX10 JASPAR yes 70763167
chr5 172209754 172209768 JUN JASPAR yes 67826077
chr5 172209754 172209768 JUN JASPAR yes 70763168
chr5 172209757 172209768 FOSL2 JASPAR yes 67826078
chr5 172209757 172209768 JUNB JASPAR yes 67826079
chr5 172209757 172209768 FOSL2 JASPAR yes 70763169
chr5 172209757 172209768 JUNB JASPAR yes 70763170
chr5 172209758 172209769 FOS JASPAR yes 67826080
chr5 172209758 172209769 FOSL1 JASPAR yes 67826081
chr5 172209758 172209769 JUND JASPAR yes 67826082
chr5 172209758 172209769 NFE2 JASPAR yes 67826083
chr5 172209758 172209769 FOS JASPAR yes 70763171
chr5 172209758 172209769 FOSL1 JASPAR yes 70763172
chr5 172209758 172209769 JUND JASPAR yes 70763173
chr5 172209758 172209769 NFE2 JASPAR yes 70763174
chr5 172209759 172209768 JDP2 JASPAR yes 67826084
chr5 172209759 172209768 JDP2 JASPAR yes 70763175
chr5 172209759 172209770 FOSL2 JASPAR yes 67826085
chr5 172209759 172209770 JUNB JASPAR yes 67826086
chr5 172209759 172209770 FOSL2 JASPAR yes 70763176
chr5 172209759 172209770 JUNB JASPAR yes 70763177
chr5 172209759 172209773 JUN JASPAR yes 67826087
chr5 172209759 172209773 JUN JASPAR yes 70763178
chr5 172209778 172209792 ONECUT2 JASPAR yes 67826088
chr5 172209778 172209792 ONECUT3 JASPAR yes 67826089
chr5 172209778 172209792 ONECUT2 JASPAR yes 70763179
chr5 172209778 172209792 ONECUT3 JASPAR yes 70763180
chr5 172209779 172209796 ZNF410 JASPAR yes 67826090
chr5 172209779 172209796 ZNF410 JASPAR yes 70763181
chr5 172209780 172209788 RHOXF1 JASPAR yes 67826091
chr5 172209780 172209788 RHOXF1 JASPAR yes 70763182
chr5 172209802 172209810 FOXO3 JASPAR yes 67826092
chr5 172209802 172209810 FOXO3 JASPAR yes 70763183
chr5 172209810 172209822 FOXI1 JASPAR yes 67826093
chr5 172209810 172209822 FOXI1 JASPAR yes 70763184
chr5 172209817 172209822 GATA2 JASPAR yes 67826094
chr5 172209817 172209822 GATA2 JASPAR yes 70763185
chr5 172209822 172209828 ZNF354C JASPAR yes 67826095
chr5 172209822 172209828 ZNF354C JASPAR yes 70763186
chr5 172209825 172209839 PAX6 JASPAR yes 67826096
chr5 172209825 172209839 PAX6 JASPAR yes 70763187
chr5 172209854 172209858 NFE TRANSFAC yes 67826097
chr5 172209854 172209858 NFE TRANSFAC yes 70763188
chr5 172209855 172209860 GATA2 JASPAR yes 67826098
chr5 172209855 172209860 GATA2 JASPAR yes 70763189
SNP sites on vista50170[chr5:172209593-172209865]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr5 172209659 rs138928186 C T
EP300 FOSL2 FOXA1 FOXA2 TCF12
8704803
chr5 172209744 rs559060309 A G,T
EP300 FOSL2 FOXA1 FOXA2 FOXC2 FOXP1 JUND NR3C1 TCF12
8704804
chr5 172209747 rs74517671 C A
EP300 FOSL2 FOXA1 FOXA2 FOXC2 FOXP1 JUND NR3C1 TCF12
8704805
Genes possibly regulated by vista50170[chr5:172209593-172209865]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr5 172195093 172198198 - DUSP1 ENSG00000120129.5 172198198 0.79 1.0 5985 88605
chr5 172261278 172379688 + ERGIC1 ENSG00000113719.11 172261278 0.61 1.0 5986 48587
Expression level of Genes
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miRNAs possibly regulated by vista50170[chr5:172209593-172209865]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results