EnhancerDB
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  3. rs74517671[chr5:172209747]
Enhancers that have rs74517671[chr5:172209747]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 172200585 172237795 enh22816
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Bone (Osteoblast) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Heart
chr5 172209593 172209865 vista50170
VISTA
Transcript factors that have rs74517671[chr5:172209747]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 172209592 172210082 EP300 UCSC Txn Factor no Conserved 108537496
chr5 172209609 172209894 FOXA1 UCSC Txn Factor no Conserved 108537497
chr5 172209618 172210046 TCF12 UCSC Txn Factor no Conserved 108537498
chr5 172209626 172209893 FOSL2 UCSC Txn Factor no Conserved 108537499
chr5 172209640 172209870 FOXA2 UCSC Txn Factor no Conserved 108537500
chr5 172209699 172209845 JUND UCSC Txn Factor no Conserved 108537501
chr5 172209737 172210047 NR3C1 UCSC Txn Factor no Conserved 108537502
chr5 172209740 172209755 FOXP1 JASPAR yes 67826072
chr5 172209740 172209755 FOXP1 JASPAR yes 70763163
chr5 172209741 172209752 FOXA1 JASPAR yes 67826073
chr5 172209741 172209752 FOXA1 JASPAR yes 70763164
chr5 172209741 172209756 FOXA1 JASPAR yes 67826074
chr5 172209741 172209756 FOXA1 JASPAR yes 70763165
chr5 172209742 172209754 FOXC2 JASPAR yes 67826075
chr5 172209742 172209754 FOXC2 JASPAR yes 70763166
Genes associated with rs74517671[chr5:172209747], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More