EnhancerDB
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  3. vista50171[chr5:172216221-172216413]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista50171[chr5:172216221-172216413]
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Tissue distribution of vista50171
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Transcription factor that possibly regulate vista50171[chr5:172216221-172216413]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr5 172215982 172216943 POLR2A UCSC Txn Factor no Conserved 108537503
chr5 172216216 172216237 REST JASPAR yes 67827117
chr5 172216216 172216237 REST JASPAR yes 70763190
chr5 172216217 172216236 REST JASPAR yes 67827118
chr5 172216217 172216236 REST JASPAR yes 70763191
chr5 172216250 172216261 ESRRA JASPAR yes 67827119
chr5 172216250 172216261 ESRRB JASPAR yes 67827120
chr5 172216250 172216261 ESRRA JASPAR yes 70763192
chr5 172216250 172216261 ESRRB JASPAR yes 70763193
chr5 172216274 172216287 NR2F1 JASPAR yes 67827121
chr5 172216274 172216287 NR2F1 JASPAR yes 70763194
chr5 172216276 172216291 JUND JASPAR yes 67827122
chr5 172216276 172216291 JUND JASPAR yes 70763195
chr5 172216277 172216285 NR4A2 JASPAR yes 67827123
chr5 172216277 172216285 NR4A2 JASPAR yes 70763196
chr5 172216277 172216290 JUN JASPAR yes 67827124
chr5 172216277 172216290 JUN JASPAR yes 70763197
chr5 172216278 172216286 CREB1 JASPAR yes 67827125
chr5 172216278 172216286 CREB1 JASPAR yes 70763198
chr5 172216278 172216295 RARA JASPAR yes 67827126
chr5 172216278 172216295 RARA JASPAR yes 70763199
chr5 172216305 172216311 SP1 TRANSFAC yes 67827127
chr5 172216305 172216311 SP1 TRANSFAC yes 70763200
chr5 172216305 172216315 SP1 JASPAR yes 67827128
chr5 172216305 172216315 SP1 JASPAR yes 70763201
chr5 172216367 172216375 GATA5 JASPAR yes 67827129
chr5 172216367 172216375 GATA5 JASPAR yes 70763202
chr5 172216381 172216396 RUNX2 JASPAR yes 67827130
chr5 172216381 172216396 RUNX2 JASPAR yes 70763203
chr5 172216383 172216394 USF1 JASPAR yes 67827131
chr5 172216383 172216394 USF2 JASPAR yes 67827132
chr5 172216383 172216394 USF1 JASPAR yes 70763204
chr5 172216383 172216394 USF2 JASPAR yes 70763205
chr5 172216384 172216394 TFE3 JASPAR yes 67827133
chr5 172216384 172216394 TFEB JASPAR yes 67827134
chr5 172216384 172216394 TFEC JASPAR yes 67827135
chr5 172216384 172216394 TFE3 JASPAR yes 70763206
chr5 172216384 172216394 TFEB JASPAR yes 70763207
chr5 172216384 172216394 TFEC JASPAR yes 70763208
chr5 172216384 172216395 USF1 JASPAR yes 67827136
chr5 172216384 172216395 USF1 JASPAR yes 70763209
SNP sites on vista50171[chr5:172216221-172216413]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr5 172216309 rs745023 C T
POLR2A SP1
8704900
chr5 172216355 rs17715219 G A,T
POLR2A
8704901
chr5 172216395 rs148725948 A ACTC
POLR2A RUNX2 USF1
8704902
Genes possibly regulated by vista50171[chr5:172216221-172216413]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr5 172195093 172198198 - DUSP1 ENSG00000120129.5 172198198 0.79 1.0 5985 81977
chr5 172261278 172379688 + ERGIC1 ENSG00000113719.11 172261278 0.61 1.0 5986 55135
Expression level of Genes
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miRNAs possibly regulated by vista50171[chr5:172216221-172216413]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results