EnhancerDB
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  3. rs148725948[chr5:172216395]
Enhancers that have rs148725948[chr5:172216395]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 172200585 172237795 enh22816
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Bone (Osteoblast) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Heart
chr5 172216221 172216413 vista50171
VISTA
Transcript factors that have rs148725948[chr5:172216395]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 172215982 172216943 POLR2A UCSC Txn Factor no Conserved 108537503
chr5 172216381 172216396 RUNX2 JASPAR yes 67827130
chr5 172216381 172216396 RUNX2 JASPAR yes 70763203
chr5 172216384 172216395 USF1 JASPAR yes 67827136
chr5 172216384 172216395 USF1 JASPAR yes 70763209
Genes associated with rs148725948[chr5:172216395], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More