EnhancerDB
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  3. vista50185[chr5:172288216-172288483]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista50185[chr5:172288216-172288483]
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Tissue distribution of vista50185
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Transcription factor that possibly regulate vista50185[chr5:172288216-172288483]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr5 172288248 172288260 HES5 JASPAR yes 67835908
chr5 172288248 172288260 HES5 JASPAR yes 70764124
chr5 172288264 172288275 E2F6 JASPAR yes 67835909
chr5 172288264 172288275 E2F6 JASPAR yes 70764125
chr5 172288288 172288297 THAP1 JASPAR yes 67835910
chr5 172288288 172288297 THAP1 JASPAR yes 70764126
chr5 172288292 172288307 JUND JASPAR yes 67835911
chr5 172288292 172288307 JUND JASPAR yes 70764127
chr5 172288293 172288306 JUN JASPAR yes 67835912
chr5 172288293 172288306 JUN JASPAR yes 70764128
chr5 172288294 172288302 CREB1 JASPAR yes 67835913
chr5 172288294 172288302 CREB1 JASPAR yes 70764129
chr5 172288320 172288324 NFE TRANSFAC yes 67835914
chr5 172288320 172288324 NFE TRANSFAC yes 70764130
chr5 172288321 172288331 ELK1 JASPAR yes 67835915
chr5 172288321 172288331 ELK1 JASPAR yes 70764131
chr5 172288330 172288334 NFE TRANSFAC yes 67835916
chr5 172288330 172288334 NFE TRANSFAC yes 70764132
chr5 172288338 172288348 CLOCK JASPAR yes 67835917
chr5 172288338 172288348 MAX JASPAR yes 67835918
chr5 172288338 172288348 CLOCK JASPAR yes 70764133
chr5 172288338 172288348 MAX JASPAR yes 70764134
chr5 172288339 172288346 USF1 JASPAR yes 67835919
chr5 172288339 172288346 USF1 JASPAR yes 70764135
chr5 172288339 172288349 MAX JASPAR yes 67835920
chr5 172288339 172288349 MAX JASPAR yes 70764136
chr5 172288340 172288345 MYC TRANSFAC yes 67835921
chr5 172288340 172288345 USF1 TRANSFAC yes 67835922
chr5 172288340 172288345 USF2 TRANSFAC yes 67835923
chr5 172288340 172288345 MYC TRANSFAC yes 70764137
chr5 172288340 172288345 USF1 TRANSFAC yes 70764138
chr5 172288340 172288345 USF2 TRANSFAC yes 70764139
chr5 172288359 172288369 SP1 JASPAR yes 67835924
chr5 172288359 172288369 SP1 JASPAR yes 70764140
chr5 172288360 172288371 E2F6 JASPAR yes 67835925
chr5 172288360 172288371 E2F6 JASPAR yes 70764141
chr5 172288369 172288384 HSF1 JASPAR yes 67835926
chr5 172288369 172288384 HSF1 JASPAR yes 70764142
chr5 172288370 172288383 HSF2 JASPAR yes 67835927
chr5 172288370 172288383 HSF4 JASPAR yes 67835928
chr5 172288370 172288383 HSF2 JASPAR yes 70764143
chr5 172288370 172288383 HSF4 JASPAR yes 70764144
chr5 172288372 172288390 NR3C1 JASPAR yes 67835929
chr5 172288372 172288390 NR3C1 JASPAR yes 70764145
chr5 172288396 172288408 FOXI1 JASPAR yes 67835930
chr5 172288396 172288408 FOXI1 JASPAR yes 70764146
chr5 172288396 172288411 FOXP1 JASPAR yes 67835931
chr5 172288396 172288411 FOXP1 JASPAR yes 70764147
chr5 172288397 172288408 FOXP2 JASPAR yes 67835932
chr5 172288397 172288408 FOXP2 JASPAR yes 70764148
chr5 172288397 172288411 FOXF2 JASPAR yes 67835933
chr5 172288397 172288411 FOXF2 JASPAR yes 70764149
chr5 172288398 172288406 FOXG1 JASPAR yes 67835934
chr5 172288398 172288406 FOXO3 JASPAR yes 67835935
chr5 172288398 172288406 FOXG1 JASPAR yes 70764150
chr5 172288398 172288406 FOXO3 JASPAR yes 70764151
chr5 172288399 172288410 HOXA10 JASPAR yes 67835936
chr5 172288399 172288410 HOXA10 JASPAR yes 70764152
chr5 172288400 172288411 CDX2 JASPAR yes 67835937
chr5 172288400 172288411 CDX2 JASPAR yes 70764153
chr5 172288409 172288413 NFE TRANSFAC yes 67835938
chr5 172288409 172288413 NFE TRANSFAC yes 70764154
chr5 172288413 172288419 SP1 TRANSFAC yes 67835939
chr5 172288413 172288419 SP1 TRANSFAC yes 70764155
chr5 172288416 172288431 RFX5 JASPAR yes 67835940
chr5 172288416 172288431 RFX5 JASPAR yes 70764156
chr5 172288442 172288453 NRF1 JASPAR yes 67835941
chr5 172288442 172288453 NRF1 JASPAR yes 70764157
chr5 172288456 172288460 NFE TRANSFAC yes 67835942
chr5 172288456 172288460 NFE TRANSFAC yes 70764158
chr5 172288457 172288477 TP63 JASPAR yes 67835943
chr5 172288457 172288477 TP63 JASPAR yes 70764159
chr5 172288458 172288476 TP53 JASPAR yes 67835944
chr5 172288458 172288476 TP53 JASPAR yes 70764160
chr5 172288465 172288480 SCRT1 JASPAR yes 67835945
chr5 172288465 172288480 SCRT1 JASPAR yes 70764161
chr5 172288474 172288488 TLX1 JASPAR yes 67835946
chr5 172288474 172288488 TLX1 JASPAR yes 70764162
SNP sites on vista50185[chr5:172288216-172288483]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr5 172288351 rs558525535 CT C no 8705822
chr5 172288366 rs113804992 C G
E2F6 SP1
8705823
chr5 172288446 rs182648088 G T
NRF1
8705824
Genes possibly regulated by vista50185[chr5:172288216-172288483]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr5 172195093 172198198 - DUSP1 ENSG00000120129.5 172198198 0.79 1.0 5985 9982
chr5 172261278 172379688 + ERGIC1 ENSG00000113719.11 172261278 0.61 1.0 5986 73062
chr5 172385732 172396774 + RPL26L1 ENSG00000037241.3 172385732 0.85 0.99 5987 2751
Expression level of Genes
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miRNAs possibly regulated by vista50185[chr5:172288216-172288483]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results