EnhancerDB
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  3. rs113804992[chr5:172288366]
Enhancers that have rs113804992[chr5:172288366]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 172258805 172341224 enh22817
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Lung (A549) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
chr5 172288216 172288483 vista50185
VISTA
Transcript factors that have rs113804992[chr5:172288366]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 172288359 172288369 SP1 JASPAR yes 67835924
chr5 172288359 172288369 SP1 JASPAR yes 70764140
chr5 172288360 172288371 E2F6 JASPAR yes 67835925
chr5 172288360 172288371 E2F6 JASPAR yes 70764141
Genes associated with rs113804992[chr5:172288366], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More