EnhancerDB
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  3. vista50187[chr5:172304591-172304758]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista50187[chr5:172304591-172304758]
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Tissue distribution of vista50187
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Transcription factor that possibly regulate vista50187[chr5:172304591-172304758]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr5 172304597 172304608 DMRT3 JASPAR yes 67838183
chr5 172304597 172304608 DMRT3 JASPAR yes 70764181
chr5 172304601 172304604 MYB TRANSFAC yes 67838184
chr5 172304601 172304604 MYB TRANSFAC yes 70764182
chr5 172304602 172304618 SOX8 JASPAR yes 67838185
chr5 172304602 172304618 SOX8 JASPAR yes 70764183
chr5 172304621 172304639 RARA JASPAR yes 67838186
chr5 172304621 172304639 RARA JASPAR yes 70764184
chr5 172304622 172304629 E2F1 TRANSFAC yes 67838187
chr5 172304622 172304629 E2F1 TRANSFAC yes 70764185
chr5 172304631 172304638 SPIB JASPAR yes 67838188
chr5 172304631 172304638 SPIB JASPAR yes 70764186
chr5 172304643 172304648 GATA2 JASPAR yes 67838189
chr5 172304643 172304648 GATA2 JASPAR yes 70764187
chr5 172304648 172304658 RELA JASPAR yes 67838190
chr5 172304648 172304658 REL JASPAR yes 67838191
chr5 172304648 172304658 RELA JASPAR yes 70764188
chr5 172304648 172304658 REL JASPAR yes 70764189
chr5 172304648 172304659 NFKB1 JASPAR yes 67838192
chr5 172304648 172304659 NFKB1 JASPAR yes 70764190
chr5 172304648 172304661 NFKB1 JASPAR yes 67838193
chr5 172304648 172304661 NFKB2 JASPAR yes 67838194
chr5 172304648 172304661 NFKB1 JASPAR yes 70764191
chr5 172304648 172304661 NFKB2 JASPAR yes 70764192
chr5 172304649 172304659 NFKB1 JASPAR yes 67838195
chr5 172304649 172304659 NFKB1 JASPAR yes 70764193
chr5 172304649 172304660 NFKB1 JASPAR yes 67838196
chr5 172304649 172304660 NFKB1 JASPAR yes 70764194
chr5 172304661 172304679 IRF2 JASPAR yes 67838197
chr5 172304661 172304679 IRF2 JASPAR yes 70764195
chr5 172304665 172304679 STAT1 JASPAR yes 67838198
chr5 172304665 172304679 STAT1 JASPAR yes 70764196
chr5 172304665 172304683 ESR2 JASPAR yes 67838199
chr5 172304665 172304683 ESR2 JASPAR yes 70764197
chr5 172304666 172304678 IRF1 JASPAR yes 67838200
chr5 172304666 172304678 IRF1 JASPAR yes 70764198
chr5 172304671 172304675 YY1 TRANSFAC yes 67838201
chr5 172304671 172304675 YY1 TRANSFAC yes 70764199
chr5 172304684 172304695 NFE2L2 JASPAR yes 67838202
chr5 172304684 172304695 NFE2L2 JASPAR yes 70764200
chr5 172304734 172304746 FOXI1 JASPAR yes 67838203
chr5 172304734 172304746 FOXI1 JASPAR yes 70764201
chr5 172304736 172304751 ESR2 JASPAR yes 67838204
chr5 172304736 172304751 ESR2 JASPAR yes 70764202
chr5 172304756 172304760 YY1 TRANSFAC yes 67838205
chr5 172304756 172304760 YY1 TRANSFAC yes 70764203
SNP sites on vista50187[chr5:172304591-172304758]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr5 172304611 rs141709328 GC G
SOX8
8706035
chr5 172304615 rs60327336 C T
SOX8
8706036
chr5 172304629 rs531355054 C T
E2F1 RARA
8706037
Genes possibly regulated by vista50187[chr5:172304591-172304758]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr5 172261278 172379688 + ERGIC1 ENSG00000113719.11 172261278 0.61 1.0 5986 56687
chr5 172385732 172396774 + RPL26L1 ENSG00000037241.3 172385732 0.85 0.99 5987 19026
Expression level of Genes
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miRNAs possibly regulated by vista50187[chr5:172304591-172304758]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results