EnhancerDB
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  3. rs531355054[chr5:172304629]
Enhancers that have rs531355054[chr5:172304629]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 172258805 172341224 enh22817
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Lung (A549) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
chr5 172304591 172304758 vista50187
VISTA
Transcript factors that have rs531355054[chr5:172304629]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 172304621 172304639 RARA JASPAR yes 67838186
chr5 172304621 172304639 RARA JASPAR yes 70764184
chr5 172304622 172304629 E2F1 TRANSFAC yes 67838187
chr5 172304622 172304629 E2F1 TRANSFAC yes 70764185
Genes associated with rs531355054[chr5:172304629], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More