EnhancerDB
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  3. vista50195[chr5:172328085-172328386]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista50195[chr5:172328085-172328386]
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Tissue distribution of vista50195
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Transcription factor that possibly regulate vista50195[chr5:172328085-172328386]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr5 172328039 172328499 EP300 UCSC Txn Factor no Conserved 108537532
chr5 172328046 172328466 TCF12 UCSC Txn Factor no Conserved 108537533
chr5 172328063 172328318 JUND UCSC Txn Factor no Conserved 108537534
chr5 172328089 172328514 NR3C1 UCSC Txn Factor no Conserved 108537535
chr5 172328140 172328323 MEF2A UCSC Txn Factor no Conserved 108537536
chr5 172328142 172328350 EGR1 UCSC Txn Factor no Conserved 108537537
chr5 172328081 172328101 RREB1 JASPAR yes 67841541
chr5 172328081 172328101 RREB1 JASPAR yes 70764739
chr5 172328107 172328125 ESR2 JASPAR yes 67841542
chr5 172328107 172328125 ESR2 JASPAR yes 70764740
chr5 172328109 172328124 ESR2 JASPAR yes 67841543
chr5 172328109 172328124 ESR2 JASPAR yes 70764741
chr5 172328110 172328114 ESR1 TRANSFAC yes 67841544
chr5 172328110 172328114 ESR1 TRANSFAC yes 70764742
chr5 172328113 172328132 CTCF JASPAR yes 67841545
chr5 172328113 172328132 CTCF JASPAR yes 70764743
chr5 172328119 172328125 SP1 TRANSFAC yes 67841546
chr5 172328119 172328125 SP1 TRANSFAC yes 70764744
chr5 172328120 172328131 E2F4 JASPAR yes 67841547
chr5 172328120 172328131 E2F6 JASPAR yes 67841548
chr5 172328120 172328131 E2F4 JASPAR yes 70764745
chr5 172328120 172328131 E2F6 JASPAR yes 70764746
chr5 172328121 172328132 E2F1 JASPAR yes 67841549
chr5 172328121 172328132 E2F1 JASPAR yes 70764747
chr5 172328142 172328145 MYB TRANSFAC yes 67841550
chr5 172328142 172328145 MYB TRANSFAC yes 70764748
chr5 172328145 172328159 POU1F1 JASPAR yes 67841551
chr5 172328145 172328159 POU1F1 JASPAR yes 70764749
chr5 172328148 172328153 ETS2 TRANSFAC yes 67841552
chr5 172328148 172328153 ETS2 TRANSFAC yes 70764750
chr5 172328148 172328156 FEV JASPAR yes 67841553
chr5 172328148 172328156 FEV JASPAR yes 70764751
chr5 172328150 172328164 RORA JASPAR yes 67841554
chr5 172328150 172328164 RORA JASPAR yes 70764752
chr5 172328150 172328165 JUND JASPAR yes 67841555
chr5 172328150 172328165 JUND JASPAR yes 70764753
chr5 172328151 172328164 JUN JASPAR yes 67841556
chr5 172328151 172328164 JUN JASPAR yes 70764754
chr5 172328152 172328166 ATF7 JASPAR yes 67841557
chr5 172328152 172328166 ATF7 JASPAR yes 70764755
chr5 172328153 172328163 RORA JASPAR yes 67841558
chr5 172328153 172328163 RORA JASPAR yes 70764756
chr5 172328153 172328165 JDP2 JASPAR yes 67841559
chr5 172328153 172328165 JDP2 JASPAR yes 70764757
chr5 172328153 172328168 JUND JASPAR yes 67841560
chr5 172328153 172328168 JUND JASPAR yes 70764758
chr5 172328154 172328167 JUN JASPAR yes 67841561
chr5 172328154 172328167 JUN JASPAR yes 70764759
chr5 172328155 172328163 CREB1 JASPAR yes 67841562
chr5 172328155 172328163 CREB1 JASPAR yes 70764760
chr5 172328156 172328164 NR4A2 JASPAR yes 67841563
chr5 172328156 172328164 NR4A2 JASPAR yes 70764761
chr5 172328158 172328162 ESR1 TRANSFAC yes 67841564
chr5 172328158 172328162 ESR1 TRANSFAC yes 70764762
chr5 172328158 172328175 PAX1 JASPAR yes 67841565
chr5 172328158 172328175 PAX1 JASPAR yes 70764763
chr5 172328161 172328166 MYC TRANSFAC yes 67841566
chr5 172328161 172328166 MYC TRANSFAC yes 70764764
chr5 172328176 172328188 YY1 JASPAR yes 67841567
chr5 172328176 172328188 YY1 JASPAR yes 70764765
chr5 172328192 172328207 RUNX2 JASPAR yes 67841568
chr5 172328192 172328207 RUNX2 JASPAR yes 70764766
chr5 172328197 172328206 RUNX2 JASPAR yes 67841569
chr5 172328197 172328206 RUNX2 JASPAR yes 70764767
chr5 172328197 172328211 GATA2 JASPAR yes 67841570
chr5 172328197 172328211 GATA2 JASPAR yes 70764768
chr5 172328208 172328220 DBP JASPAR yes 67841571
chr5 172328208 172328220 DBP JASPAR yes 70764769
chr5 172328238 172328252 GLIS2 JASPAR yes 67841572
chr5 172328238 172328252 GLIS3 JASPAR yes 67841573
chr5 172328238 172328252 GLIS2 JASPAR yes 70764770
chr5 172328238 172328252 GLIS3 JASPAR yes 70764771
chr5 172328238 172328258 RREB1 JASPAR yes 67841574
chr5 172328238 172328258 RREB1 JASPAR yes 70764772
chr5 172328240 172328260 RREB1 JASPAR yes 67841575
chr5 172328240 172328260 RREB1 JASPAR yes 70764773
chr5 172328241 172328246 SP1 TRANSFAC yes 67841576
chr5 172328241 172328246 SP1 TRANSFAC yes 70764774
chr5 172328241 172328262 ZNF263 JASPAR yes 67841577
chr5 172328241 172328262 ZNF263 JASPAR yes 70764775
chr5 172328242 172328252 ZNF740 JASPAR yes 67841578
chr5 172328242 172328252 ZNF740 JASPAR yes 70764776
chr5 172328244 172328258 PLAG1 JASPAR yes 67841579
chr5 172328244 172328258 PLAG1 JASPAR yes 70764777
chr5 172328245 172328259 PLAG1 JASPAR yes 67841580
chr5 172328245 172328259 PLAG1 JASPAR yes 70764778
chr5 172328245 172328260 NR2C2 JASPAR yes 67841581
chr5 172328245 172328260 NR2C2 JASPAR yes 70764779
chr5 172328247 172328257 SP1 JASPAR yes 67841582
chr5 172328247 172328257 SP1 JASPAR yes 70764780
chr5 172328250 172328260 MZF1 JASPAR yes 67841583
chr5 172328250 172328260 MZF1 JASPAR yes 70764781
chr5 172328263 172328267 YY1 TRANSFAC yes 67841584
chr5 172328263 172328267 YY1 TRANSFAC yes 70764782
chr5 172328265 172328285 RREB1 JASPAR yes 67841585
chr5 172328265 172328285 RREB1 JASPAR yes 70764783
chr5 172328270 172328282 ZBTB7B JASPAR yes 67841586
chr5 172328270 172328282 ZBTB7C JASPAR yes 67841587
chr5 172328270 172328282 ZBTB7B JASPAR yes 70764784
chr5 172328270 172328282 ZBTB7C JASPAR yes 70764785
chr5 172328271 172328283 ZBTB7A JASPAR yes 67841588
chr5 172328271 172328283 ZBTB7A JASPAR yes 70764786
chr5 172328307 172328317 EMX1 JASPAR yes 67841589
chr5 172328307 172328317 EMX2 JASPAR yes 67841590
chr5 172328307 172328317 ESX1 JASPAR yes 67841591
chr5 172328307 172328317 EVX1 JASPAR yes 67841592
chr5 172328307 172328317 EVX2 JASPAR yes 67841593
chr5 172328307 172328317 HESX1 JASPAR yes 67841594
chr5 172328307 172328317 HOXA2 JASPAR yes 67841595
chr5 172328307 172328317 HOXB2 JASPAR yes 67841596
chr5 172328307 172328317 HOXB3 JASPAR yes 67841597
chr5 172328307 172328317 LHX6 JASPAR yes 67841598
chr5 172328307 172328317 MNX1 JASPAR yes 67841599
chr5 172328307 172328317 RAX JASPAR yes 67841600
chr5 172328307 172328317 EMX1 JASPAR yes 70764787
chr5 172328307 172328317 EMX2 JASPAR yes 70764788
chr5 172328307 172328317 ESX1 JASPAR yes 70764789
chr5 172328307 172328317 EVX1 JASPAR yes 70764790
chr5 172328307 172328317 EVX2 JASPAR yes 70764791
chr5 172328307 172328317 HESX1 JASPAR yes 70764792
chr5 172328307 172328317 HOXA2 JASPAR yes 70764793
chr5 172328307 172328317 HOXB2 JASPAR yes 70764794
chr5 172328307 172328317 HOXB3 JASPAR yes 70764795
chr5 172328307 172328317 LHX6 JASPAR yes 70764796
chr5 172328307 172328317 MNX1 JASPAR yes 70764797
chr5 172328307 172328317 RAX JASPAR yes 70764798
chr5 172328308 172328316 LMX1A JASPAR yes 67841601
chr5 172328308 172328316 LMX1B JASPAR yes 67841602
chr5 172328308 172328316 NKX6-1 JASPAR yes 67841603
chr5 172328308 172328316 NKX6-2 JASPAR yes 67841604
chr5 172328308 172328316 VAX1 JASPAR yes 67841605
chr5 172328308 172328316 VAX2 JASPAR yes 67841606
chr5 172328308 172328316 VSX1 JASPAR yes 67841607
chr5 172328308 172328316 VSX2 JASPAR yes 67841608
chr5 172328308 172328316 LMX1A JASPAR yes 70764799
chr5 172328308 172328316 LMX1B JASPAR yes 70764800
chr5 172328308 172328316 NKX6-1 JASPAR yes 70764801
chr5 172328308 172328316 NKX6-2 JASPAR yes 70764802
chr5 172328308 172328316 VAX1 JASPAR yes 70764803
chr5 172328308 172328316 VAX2 JASPAR yes 70764804
chr5 172328308 172328316 VSX1 JASPAR yes 70764805
chr5 172328308 172328316 VSX2 JASPAR yes 70764806
chr5 172328313 172328318 GATA2 JASPAR yes 67841609
chr5 172328313 172328318 GATA2 JASPAR yes 70764807
chr5 172328332 172328347 AR JASPAR yes 67841610
chr5 172328332 172328347 AR JASPAR yes 70764808
chr5 172328355 172328363 FOXO3 JASPAR yes 67841611
chr5 172328355 172328363 FOXO3 JASPAR yes 70764809
chr5 172328372 172328378 SP1 TRANSFAC yes 67841612
chr5 172328372 172328378 SP1 TRANSFAC yes 70764810
chr5 172328372 172328382 SP1 JASPAR yes 67841613
chr5 172328372 172328382 SP1 JASPAR yes 70764811
chr5 172328372 172328387 TFAP2C JASPAR yes 67841614
chr5 172328372 172328387 TFAP2C JASPAR yes 70764812
SNP sites on vista50195[chr5:172328085-172328386]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr5 172328133 rs546388 C T
EP300 JUND NR3C1 TCF12
8706340
chr5 172328166 rs115623396 G A
ATF7 EGR1 EP300 JUN JUND MEF2A MYC NR3C1 PAX1 TCF12
8706341
chr5 172328250 rs186721863 G C
EGR1 EP300 GLIS2 GLIS3 JUND MEF2A MZF1 NR2C2 NR3C1 PLAG1 RREB1 SP1 TCF12 ZNF263 ZNF740
8706342
chr5 172328286 rs74433541 C T
EGR1 EP300 JUND MEF2A NR3C1 TCF12
8706343
chr5 172328308 rs74942093 G A
EGR1 EMX1 EMX2 EP300 ESX1 EVX1 EVX2 HESX1 HOXA2 HOXB2 HOXB3 JUND LHX6 LMX1A LMX1B MEF2A MNX1 NKX6-1 NKX6-2 NR3C1 RAX TCF12 VAX1 VAX2 VSX1 VSX2
8706344
chr5 172328381 rs371307109 C T
EP300 NR3C1 SP1 TCF12 TFAP2C
8706345
Genes possibly regulated by vista50195[chr5:172328085-172328386]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr5 172261278 172379688 + ERGIC1 ENSG00000113719.11 172261278 0.61 1.0 5986 33193
chr5 172385732 172396774 + RPL26L1 ENSG00000037241.3 172385732 0.85 0.99 5987 42654
chr5 172410760 172462448 + ATP6V0E1 ENSG00000113732.4 172410760 0.6 0.99 5988 17626
Expression level of Genes
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miRNAs possibly regulated by vista50195[chr5:172328085-172328386]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results