EnhancerDB
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  3. rs115623396[chr5:172328166]
Enhancers that have rs115623396[chr5:172328166]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 172258805 172341224 enh22817
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Lung (A549) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
chr5 172328085 172328386 vista50195
VISTA
Transcript factors that have rs115623396[chr5:172328166]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 172328039 172328499 EP300 UCSC Txn Factor no Conserved 108537532
chr5 172328046 172328466 TCF12 UCSC Txn Factor no Conserved 108537533
chr5 172328063 172328318 JUND UCSC Txn Factor no Conserved 108537534
chr5 172328089 172328514 NR3C1 UCSC Txn Factor no Conserved 108537535
chr5 172328140 172328323 MEF2A UCSC Txn Factor no Conserved 108537536
chr5 172328142 172328350 EGR1 UCSC Txn Factor no Conserved 108537537
chr5 172328152 172328166 ATF7 JASPAR yes 67841557
chr5 172328152 172328166 ATF7 JASPAR yes 70764755
chr5 172328153 172328168 JUND JASPAR yes 67841560
chr5 172328153 172328168 JUND JASPAR yes 70764758
chr5 172328154 172328167 JUN JASPAR yes 67841561
chr5 172328154 172328167 JUN JASPAR yes 70764759
chr5 172328158 172328175 PAX1 JASPAR yes 67841565
chr5 172328158 172328175 PAX1 JASPAR yes 70764763
chr5 172328161 172328166 MYC TRANSFAC yes 67841566
chr5 172328161 172328166 MYC TRANSFAC yes 70764764
Genes associated with rs115623396[chr5:172328166], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More