EnhancerDB
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  3. vista5022[chr1:212841280-212841455]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista5022[chr1:212841280-212841455]
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Tissue distribution of vista5022
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Transcription factor that possibly regulate vista5022[chr1:212841280-212841455]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 212841171 212841389 GATA2 UCSC Txn Factor no Conserved 107869290
chr1 212841289 212841308 PAX5 JASPAR yes 35145970
chr1 212841289 212841308 PAX5 JASPAR yes 118454882
chr1 212841295 212841305 MSC JASPAR yes 35145971
chr1 212841295 212841305 MSC JASPAR yes 118454883
chr1 212841299 212841320 REST JASPAR yes 35145972
chr1 212841299 212841320 REST JASPAR yes 118454884
chr1 212841300 212841319 REST JASPAR yes 35145973
chr1 212841300 212841319 REST JASPAR yes 118454885
chr1 212841319 212841329 GABPA JASPAR yes 35145974
chr1 212841319 212841329 GABPA JASPAR yes 118454886
chr1 212841319 212841332 ELF1 JASPAR yes 35145975
chr1 212841319 212841332 ELF1 JASPAR yes 118454887
chr1 212841319 212841333 SPI1 JASPAR yes 35145976
chr1 212841319 212841333 SPIC JASPAR yes 35145977
chr1 212841319 212841333 SPI1 JASPAR yes 118454888
chr1 212841319 212841333 SPIC JASPAR yes 118454889
chr1 212841320 212841328 EHF JASPAR yes 35145978
chr1 212841320 212841328 EHF JASPAR yes 118454890
chr1 212841330 212841341 EBF1 JASPAR yes 35145979
chr1 212841330 212841341 EBF1 JASPAR yes 118454891
chr1 212841349 212841354 TFAP2A TRANSFAC yes 35145980
chr1 212841349 212841354 TFAP2A TRANSFAC yes 118454892
chr1 212841349 212841355 MZF1 JASPAR yes 35145981
chr1 212841349 212841355 MZF1 JASPAR yes 118454893
chr1 212841359 212841371 TAL1 JASPAR yes 35145982
chr1 212841359 212841371 TAL1 JASPAR yes 118454894
chr1 212841360 212841372 BHLHE23 JASPAR yes 35145983
chr1 212841360 212841372 BHLHE23 JASPAR yes 118454895
chr1 212841361 212841371 BHLHE22 JASPAR yes 35145984
chr1 212841361 212841371 NEUROD2 JASPAR yes 35145985
chr1 212841361 212841371 NEUROG2 JASPAR yes 35145986
chr1 212841361 212841371 OLIG1 JASPAR yes 35145987
chr1 212841361 212841371 OLIG2 JASPAR yes 35145988
chr1 212841361 212841371 OLIG3 JASPAR yes 35145989
chr1 212841361 212841371 BHLHE22 JASPAR yes 118454896
chr1 212841361 212841371 NEUROD2 JASPAR yes 118454897
chr1 212841361 212841371 NEUROG2 JASPAR yes 118454898
chr1 212841361 212841371 OLIG1 JASPAR yes 118454899
chr1 212841361 212841371 OLIG2 JASPAR yes 118454900
chr1 212841361 212841371 OLIG3 JASPAR yes 118454901
chr1 212841361 212841373 TAL1 JASPAR yes 35145990
chr1 212841361 212841373 TAL1 JASPAR yes 118454902
chr1 212841371 212841382 FOS JASPAR yes 35145991
chr1 212841371 212841382 FOSL1 JASPAR yes 35145992
chr1 212841371 212841382 JUND JASPAR yes 35145993
chr1 212841371 212841382 FOS JASPAR yes 118454903
chr1 212841371 212841382 FOSL1 JASPAR yes 118454904
chr1 212841371 212841382 JUND JASPAR yes 118454905
chr1 212841372 212841385 DUXA JASPAR yes 35145994
chr1 212841372 212841385 DUXA JASPAR yes 118454906
chr1 212841372 212841386 JUN JASPAR yes 35145995
chr1 212841372 212841386 JUN JASPAR yes 118454907
chr1 212841373 212841384 BATF JASPAR yes 35145996
chr1 212841373 212841384 DUX4 JASPAR yes 35145997
chr1 212841373 212841384 BATF JASPAR yes 118454908
chr1 212841373 212841384 DUX4 JASPAR yes 118454909
chr1 212841378 212841382 YY1 TRANSFAC yes 35145998
chr1 212841378 212841382 YY1 TRANSFAC yes 118454910
chr1 212841406 212841415 NFIX JASPAR yes 35145999
chr1 212841406 212841415 NFIX JASPAR yes 118454911
chr1 212841407 212841413 NFIC JASPAR yes 35146000
chr1 212841407 212841413 NFIC JASPAR yes 118454912
chr1 212841430 212841436 ETS1 JASPAR yes 35146001
chr1 212841430 212841436 SPI1 JASPAR yes 35146002
chr1 212841430 212841436 ETS1 JASPAR yes 118454913
chr1 212841430 212841436 SPI1 JASPAR yes 118454914
chr1 212841432 212841452 RREB1 JASPAR yes 35146003
chr1 212841432 212841452 RREB1 JASPAR yes 118454915
chr1 212841433 212841443 MSC JASPAR yes 35146004
chr1 212841433 212841443 MSC JASPAR yes 118454916
chr1 212841437 212841449 IRF1 JASPAR yes 35146005
chr1 212841437 212841449 IRF1 JASPAR yes 118454917
chr1 212841437 212841451 IRF7 JASPAR yes 35146006
chr1 212841437 212841451 IRF7 JASPAR yes 118454918
chr1 212841437 212841452 IRF9 JASPAR yes 35146007
chr1 212841437 212841452 IRF9 JASPAR yes 118454919
chr1 212841446 212841461 STAT2 JASPAR yes 35146008
chr1 212841446 212841461 STAT2 JASPAR yes 118454920
chr1 212841447 212841461 STAT1 JASPAR yes 35146009
chr1 212841447 212841461 STAT1 JASPAR yes 118454921
chr1 212841453 212841457 YY1 TRANSFAC yes 35146010
chr1 212841453 212841457 YY1 TRANSFAC yes 118454922
SNP sites on vista5022[chr1:212841280-212841455]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 212841294 rs541371742 C T
GATA2 PAX5
924999
chr1 212841365 rs577874960 A G
BHLHE22 BHLHE23 GATA2 NEUROD2 NEUROG2 OLIG1 OLIG2 OLIG3 TAL1
925000
chr1 212841418 rs190283199 T A,C no 925001
Genes possibly regulated by vista5022[chr1:212841280-212841455]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 212797789 212800120 + FAM71A ENSG00000162771.6 212797789 0.96 1.0 1829 56509
chr1 212859760 212873327 - BATF3 ENSG00000123685.4 212873327 0.87 1.0 1830 68128
Expression level of Genes
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miRNAs possibly regulated by vista5022[chr1:212841280-212841455]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results