EnhancerDB
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  3. rs541371742[chr1:212841294]
Enhancers that have rs541371742[chr1:212841294]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 212836474 212847396 enh12648
Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-SH) Brain (SK-N-MC) Prostate (RWPE1) Esophagus Astrocyte Lung Stomach Muscle (A673) Placenta Pancreas (Panc1) Muscle (Myoblast) Spleen Muscle (Myotube) Uterus Heart
chr1 212841280 212841455 vista5022
VISTA
Transcript factors that have rs541371742[chr1:212841294]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 212840878 212841362 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 107869280
chr1 212840878 212841362 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 107869281
chr1 212840926 212841336 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 107869283
chr1 212840926 212841336 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 107869284
chr1 212840929 212841505 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 107869285
chr1 212840929 212841505 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 107869286
chr1 212841153 212841489 POL24H8 ENCODE Uniform TFBS no Brain (SK-N-MC) 21379042
chr1 212841153 212841489 POL24H8 ENCODE Uniform TFBS no Brain (SK-N-MC) 107869289
chr1 212841171 212841389 GATA2 UCSC Txn Factor no Conserved 107869290
chr1 212841244 212841461 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 21379043
chr1 212841244 212841461 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 107869291
chr1 212841289 212841308 PAX5 JASPAR yes 35145970
chr1 212841289 212841308 PAX5 JASPAR yes 118454882
Genes associated with rs541371742[chr1:212841294], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More