EnhancerDB
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  3. vista50237[chr5:173251298-173251668]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista50237[chr5:173251298-173251668]
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Tissue distribution of vista50237
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Transcription factor that possibly regulate vista50237[chr5:173251298-173251668]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr5 173250996 173251527 GATA3 UCSC Txn Factor no Conserved 108537610
chr5 173251051 173251653 TCF12 UCSC Txn Factor no Conserved 108537611
chr5 173251067 173251572 FOXA1 UCSC Txn Factor no Conserved 108537612
chr5 173251100 173251567 FOXA2 UCSC Txn Factor no Conserved 108537613
chr5 173251124 173251635 EP300 UCSC Txn Factor no Conserved 108537614
chr5 173251159 173251527 NFIC UCSC Txn Factor no Conserved 108537615
chr5 173251165 173251576 TEAD4 UCSC Txn Factor no Conserved 108537616
chr5 173251222 173251609 REST UCSC Txn Factor no Conserved 108537617
chr5 173251224 173251488 CEBPB UCSC Txn Factor no Conserved 108537618
chr5 173251288 173251306 MAFF JASPAR yes 67910824
chr5 173251288 173251306 MAFF JASPAR yes 70767025
chr5 173251289 173251304 MAFK JASPAR yes 67910825
chr5 173251289 173251304 MAFK JASPAR yes 70767026
chr5 173251305 173251309 H4TF2 TRANSFAC yes 67910826
chr5 173251305 173251309 H4TF2 TRANSFAC yes 70767027
chr5 173251308 173251320 GRHL1 JASPAR yes 67910827
chr5 173251308 173251320 GRHL1 JASPAR yes 70767028
chr5 173251311 173251317 PTF TRANSFAC yes 67910828
chr5 173251311 173251317 PTF TRANSFAC yes 70767029
chr5 173251311 173251326 FOXP1 JASPAR yes 67910829
chr5 173251311 173251326 FOXP1 JASPAR yes 70767030
chr5 173251312 173251323 FOXP2 JASPAR yes 67910830
chr5 173251312 173251323 FOXP2 JASPAR yes 70767031
chr5 173251314 173251322 FOXO3 JASPAR yes 67910831
chr5 173251314 173251322 FOXO3 JASPAR yes 70767032
chr5 173251318 173251323 ETS2 TRANSFAC yes 67910832
chr5 173251318 173251323 ETS2 TRANSFAC yes 70767033
chr5 173251343 173251358 HNF4G JASPAR yes 67910833
chr5 173251343 173251358 HNF4G JASPAR yes 70767034
chr5 173251344 173251359 HNF4A JASPAR yes 67910834
chr5 173251344 173251359 HNF4A JASPAR yes 70767035
chr5 173251349 173251359 TEAD4 JASPAR yes 67910835
chr5 173251349 173251359 TEAD4 JASPAR yes 70767036
chr5 173251360 173251380 PPARG JASPAR yes 67910836
chr5 173251360 173251380 PPARG JASPAR yes 70767037
chr5 173251363 173251367 LFA1 TRANSFAC yes 67910837
chr5 173251363 173251367 LFA1 TRANSFAC yes 70767038
chr5 173251365 173251379 FOXF2 JASPAR yes 67910838
chr5 173251365 173251379 FOXF2 JASPAR yes 70767039
chr5 173251365 173251380 FOXP1 JASPAR yes 67910839
chr5 173251365 173251380 FOXP1 JASPAR yes 70767040
chr5 173251366 173251377 FOXA1 JASPAR yes 67910840
chr5 173251366 173251377 FOXA1 JASPAR yes 70767041
chr5 173251366 173251381 FOXA1 JASPAR yes 67910841
chr5 173251366 173251381 FOXA1 JASPAR yes 70767042
chr5 173251368 173251373 GATA2 JASPAR yes 67910842
chr5 173251368 173251373 GATA2 JASPAR yes 70767043
chr5 173251368 173251379 FOXP2 JASPAR yes 67910843
chr5 173251368 173251379 FOXP2 JASPAR yes 70767044
chr5 173251370 173251378 FOXG1 JASPAR yes 67910844
chr5 173251370 173251378 FOXO3 JASPAR yes 67910845
chr5 173251370 173251378 FOXG1 JASPAR yes 70767045
chr5 173251370 173251378 FOXO3 JASPAR yes 70767046
chr5 173251385 173251403 NFYA JASPAR yes 67910846
chr5 173251385 173251403 NFYA JASPAR yes 70767047
chr5 173251386 173251401 HNF1A JASPAR yes 67910847
chr5 173251386 173251401 HNF1A JASPAR yes 70767048
chr5 173251387 173251400 HNF1B JASPAR yes 67910848
chr5 173251387 173251400 HNF1B JASPAR yes 70767049
chr5 173251390 173251402 PBX1 JASPAR yes 67910849
chr5 173251390 173251402 PBX1 JASPAR yes 70767050
chr5 173251391 173251406 NFYB JASPAR yes 67910850
chr5 173251391 173251406 NFYB JASPAR yes 70767051
chr5 173251393 173251398 NFY TRANSFAC yes 67910851
chr5 173251393 173251398 NFY TRANSFAC yes 70767052
chr5 173251404 173251415 STAT3 JASPAR yes 67910852
chr5 173251404 173251415 STAT3 JASPAR yes 70767053
chr5 173251406 173251418 TEAD1 JASPAR yes 67910853
chr5 173251406 173251418 TEAD1 JASPAR yes 70767054
chr5 173251408 173251418 TEAD1 JASPAR yes 67910854
chr5 173251408 173251418 TEAD4 JASPAR yes 67910855
chr5 173251408 173251418 TEAD1 JASPAR yes 70767055
chr5 173251408 173251418 TEAD4 JASPAR yes 70767056
chr5 173251409 173251417 TEAD3 JASPAR yes 67910856
chr5 173251409 173251417 TEAD3 JASPAR yes 70767057
chr5 173251420 173251431 RUNX1 JASPAR yes 67910857
chr5 173251420 173251431 RUNX1 JASPAR yes 70767058
chr5 173251452 173251464 INSM1 JASPAR yes 67910858
chr5 173251452 173251464 INSM1 JASPAR yes 70767059
chr5 173251462 173251473 FOXP2 JASPAR yes 67910859
chr5 173251462 173251473 FOXP2 JASPAR yes 70767060
chr5 173251463 173251471 FOXD1 JASPAR yes 67910860
chr5 173251463 173251471 FOXO3 JASPAR yes 67910861
chr5 173251463 173251471 FOXD1 JASPAR yes 70767061
chr5 173251463 173251471 FOXO3 JASPAR yes 70767062
chr5 173251464 173251471 FOXD2 JASPAR yes 67910862
chr5 173251464 173251471 FOXI1 JASPAR yes 67910863
chr5 173251464 173251471 FOXL1 JASPAR yes 67910864
chr5 173251464 173251471 FOXO4 JASPAR yes 67910865
chr5 173251464 173251471 FOXO6 JASPAR yes 67910866
chr5 173251464 173251471 FOXP3 JASPAR yes 67910867
chr5 173251464 173251471 FOXD2 JASPAR yes 70767063
chr5 173251464 173251471 FOXI1 JASPAR yes 70767064
chr5 173251464 173251471 FOXL1 JASPAR yes 70767065
chr5 173251464 173251471 FOXO4 JASPAR yes 70767066
chr5 173251464 173251471 FOXO6 JASPAR yes 70767067
chr5 173251464 173251471 FOXP3 JASPAR yes 70767068
chr5 173251464 173251472 FOXO3 JASPAR yes 67910868
chr5 173251464 173251472 FOXO3 JASPAR yes 70767069
chr5 173251476 173251487 HOXC11 JASPAR yes 67910869
chr5 173251476 173251487 HOXC12 JASPAR yes 67910870
chr5 173251476 173251487 HOXC11 JASPAR yes 70767070
chr5 173251476 173251487 HOXC12 JASPAR yes 70767071
chr5 173251477 173251487 HOXD11 JASPAR yes 67910871
chr5 173251477 173251487 HOXD11 JASPAR yes 70767072
chr5 173251482 173251496 SPI1 JASPAR yes 67910872
chr5 173251482 173251496 SPIC JASPAR yes 67910873
chr5 173251482 173251496 SPI1 JASPAR yes 70767073
chr5 173251482 173251496 SPIC JASPAR yes 70767074
chr5 173251483 173251496 ELF1 JASPAR yes 67910874
chr5 173251483 173251496 ELF1 JASPAR yes 70767075
chr5 173251484 173251496 ELF4 JASPAR yes 67910875
chr5 173251484 173251496 ELF4 JASPAR yes 70767076
chr5 173251485 173251496 ETV2 JASPAR yes 67910876
chr5 173251485 173251496 ETV2 JASPAR yes 70767077
chr5 173251486 173251497 FLI1 JASPAR yes 67910877
chr5 173251486 173251497 FLI1 JASPAR yes 70767078
chr5 173251487 173251495 EHF JASPAR yes 67910878
chr5 173251487 173251495 EHF JASPAR yes 70767079
chr5 173251526 173251530 YY1 TRANSFAC yes 67910879
chr5 173251526 173251530 YY1 TRANSFAC yes 70767080
chr5 173251529 173251533 YY1 TRANSFAC yes 67910880
chr5 173251529 173251533 YY1 TRANSFAC yes 70767081
chr5 173251559 173251563 LFA1 TRANSFAC yes 67910881
chr5 173251559 173251563 LFA1 TRANSFAC yes 70767082
chr5 173251560 173251570 ID4 JASPAR yes 67910882
chr5 173251560 173251570 TCF3 JASPAR yes 67910883
chr5 173251560 173251570 TCF4 JASPAR yes 67910884
chr5 173251560 173251570 ID4 JASPAR yes 70767083
chr5 173251560 173251570 TCF3 JASPAR yes 70767084
chr5 173251560 173251570 TCF4 JASPAR yes 70767085
chr5 173251561 173251570 SNAI2 JASPAR yes 67910885
chr5 173251561 173251570 SNAI2 JASPAR yes 70767086
chr5 173251562 173251567 USF2 TRANSFAC yes 67910886
chr5 173251562 173251567 USF2 TRANSFAC yes 70767087
chr5 173251562 173251579 BCL6B JASPAR yes 67910887
chr5 173251562 173251579 BCL6B JASPAR yes 70767088
chr5 173251603 173251616 POU2F2 JASPAR yes 67910888
chr5 173251603 173251616 POU2F2 JASPAR yes 70767089
chr5 173251607 173251617 NFKB1 JASPAR yes 67910889
chr5 173251607 173251617 NFKB1 JASPAR yes 70767090
chr5 173251620 173251624 ESR1 TRANSFAC yes 67910890
chr5 173251620 173251624 ESR1 TRANSFAC yes 70767091
chr5 173251641 173251644 MYB TRANSFAC yes 67910891
chr5 173251641 173251644 MYB TRANSFAC yes 70767092
chr5 173251652 173251663 NFIL3 JASPAR yes 67910892
chr5 173251652 173251663 NFIL3 JASPAR yes 70767093
SNP sites on vista50237[chr5:173251298-173251668]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr5 173251306 rs527483042 G A
CEBPB EP300 FOXA1 FOXA2 GATA3 H4TF2 MAFF NFIC REST TCF12 TEAD4
8713599
chr5 173251614 rs535516646 T A
EP300 NFKB1 POU2F2 TCF12
8713600
chr5 173251642 rs147943659 T G
MYB TCF12
8713601
Genes possibly regulated by vista50237[chr5:173251298-173251668]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr5 173315283 173388979 + CPEB4 ENSG00000113742.8 173315283 0.72 0.97 5994 36385
Expression level of Genes
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miRNAs possibly regulated by vista50237[chr5:173251298-173251668]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results