EnhancerDB
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  3. rs535516646[chr5:173251614]
Enhancers that have rs535516646[chr5:173251614]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 173178093 173268555 enh8886
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Spleen Muscle (Myotube) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
chr5 173251298 173251668 vista50237
VISTA
Transcript factors that have rs535516646[chr5:173251614]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 173251051 173251653 TCF12 UCSC Txn Factor no Conserved 108537611
chr5 173251124 173251635 EP300 UCSC Txn Factor no Conserved 108537614
chr5 173251603 173251616 POU2F2 JASPAR yes 67910888
chr5 173251603 173251616 POU2F2 JASPAR yes 70767089
chr5 173251607 173251617 NFKB1 JASPAR yes 67910889
chr5 173251607 173251617 NFKB1 JASPAR yes 70767090
Genes associated with rs535516646[chr5:173251614], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More