EnhancerDB
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  3. vista5038[chr1:213090277-213090696]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista5038[chr1:213090277-213090696]
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Tissue distribution of vista5038
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Transcription factor that possibly regulate vista5038[chr1:213090277-213090696]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 213090113 213090353 EGR1 UCSC Txn Factor no Conserved 107869443
chr1 213090235 213090556 SP1 UCSC Txn Factor no Conserved 107869460
chr1 213090262 213090279 BCL6B JASPAR yes 35154523
chr1 213090262 213090279 BCL6B JASPAR yes 118455644
chr1 213090311 213090332 ZNF263 JASPAR yes 35154524
chr1 213090311 213090332 ZNF263 JASPAR yes 118455645
chr1 213090319 213090340 ZNF263 JASPAR yes 35154525
chr1 213090319 213090340 ZNF263 JASPAR yes 118455646
chr1 213090323 213090331 EHF JASPAR yes 35154526
chr1 213090323 213090331 EHF JASPAR yes 118455647
chr1 213090323 213090344 ZNF263 JASPAR yes 35154527
chr1 213090323 213090344 ZNF263 JASPAR yes 118455648
chr1 213090325 213090346 ZNF263 JASPAR yes 35154528
chr1 213090325 213090346 ZNF263 JASPAR yes 118455649
chr1 213090326 213090347 ZNF263 JASPAR yes 35154529
chr1 213090326 213090347 ZNF263 JASPAR yes 118455650
chr1 213090330 213090336 SP1 TRANSFAC yes 35154530
chr1 213090330 213090336 SP1 TRANSFAC yes 118455651
chr1 213090330 213090340 SP1 JASPAR yes 35154531
chr1 213090330 213090340 SP1 JASPAR yes 118455652
chr1 213090338 213090342 NFE TRANSFAC yes 35154532
chr1 213090338 213090342 NFE TRANSFAC yes 118455653
chr1 213090339 213090344 GATA2 JASPAR yes 35154533
chr1 213090339 213090344 GATA2 JASPAR yes 118455654
chr1 213090348 213090352 LFA1 TRANSFAC yes 35154534
chr1 213090348 213090352 LFA1 TRANSFAC yes 118455655
chr1 213090358 213090368 ELK1 JASPAR yes 35154535
chr1 213090358 213090368 ELK1 JASPAR yes 118455656
chr1 213090360 213090370 GABPA JASPAR yes 35154536
chr1 213090360 213090370 GABPA JASPAR yes 118455657
chr1 213090362 213090368 ETS1 JASPAR yes 35154537
chr1 213090362 213090368 SPI1 JASPAR yes 35154538
chr1 213090362 213090368 ETS1 JASPAR yes 118455658
chr1 213090362 213090368 SPI1 JASPAR yes 118455659
chr1 213090372 213090393 ZNF263 JASPAR yes 35154539
chr1 213090372 213090393 ZNF263 JASPAR yes 118455660
chr1 213090373 213090379 ZNF354C JASPAR yes 35154540
chr1 213090373 213090379 ZNF354C JASPAR yes 118455661
chr1 213090380 213090401 ZNF263 JASPAR yes 35154541
chr1 213090380 213090401 ZNF263 JASPAR yes 118455662
chr1 213090384 213090405 ZNF263 JASPAR yes 35154542
chr1 213090384 213090405 ZNF263 JASPAR yes 118455663
chr1 213090386 213090407 ZNF263 JASPAR yes 35154543
chr1 213090386 213090407 ZNF263 JASPAR yes 118455664
chr1 213090389 213090410 ZNF263 JASPAR yes 35154544
chr1 213090389 213090410 ZNF263 JASPAR yes 118455665
chr1 213090395 213090400 GATA2 JASPAR yes 35154545
chr1 213090395 213090400 GATA2 JASPAR yes 118455666
chr1 213090395 213090410 PRDM1 JASPAR yes 35154546
chr1 213090395 213090410 PRDM1 JASPAR yes 118455667
chr1 213090395 213090413 IRF2 JASPAR yes 35154547
chr1 213090395 213090413 IRF2 JASPAR yes 118455668
chr1 213090405 213090410 SP1 TRANSFAC yes 35154548
chr1 213090405 213090410 SP1 TRANSFAC yes 118455669
chr1 213090406 213090411 SP1 TRANSFAC yes 35154549
chr1 213090406 213090411 SP1 TRANSFAC yes 118455670
chr1 213090413 213090420 NFATC2 JASPAR yes 35154550
chr1 213090413 213090420 NFATC2 JASPAR yes 118455671
chr1 213090422 213090437 TFAP2A JASPAR yes 35154551
chr1 213090422 213090437 TFAP2C JASPAR yes 35154552
chr1 213090422 213090437 TFAP2A JASPAR yes 118455672
chr1 213090422 213090437 TFAP2C JASPAR yes 118455673
chr1 213090430 213090441 CDX2 JASPAR yes 35154553
chr1 213090430 213090441 CDX2 JASPAR yes 118455674
chr1 213090430 213090445 STAT2 JASPAR yes 35154554
chr1 213090430 213090445 STAT2 JASPAR yes 118455675
chr1 213090431 213090441 MNX1 JASPAR yes 35154555
chr1 213090431 213090441 MNX1 JASPAR yes 118455676
chr1 213090431 213090442 HOXA10 JASPAR yes 35154556
chr1 213090431 213090442 HOXA10 JASPAR yes 118455677
chr1 213090432 213090441 CDX1 JASPAR yes 35154557
chr1 213090432 213090441 CDX1 JASPAR yes 118455678
chr1 213090432 213090442 HOXA13 JASPAR yes 35154558
chr1 213090432 213090442 HOXD13 JASPAR yes 35154559
chr1 213090432 213090442 HOXA13 JASPAR yes 118455679
chr1 213090432 213090442 HOXD13 JASPAR yes 118455680
chr1 213090444 213090455 E2F6 JASPAR yes 35154560
chr1 213090444 213090455 E2F6 JASPAR yes 118455681
chr1 213090494 213090500 YY1 JASPAR yes 35154561
chr1 213090494 213090500 YY1 JASPAR yes 118455682
chr1 213090508 213090529 ZNF263 JASPAR yes 35154562
chr1 213090508 213090529 ZNF263 JASPAR yes 118455683
chr1 213090511 213090532 ZNF263 JASPAR yes 35154563
chr1 213090511 213090532 ZNF263 JASPAR yes 118455684
chr1 213090536 213090541 ETS2 TRANSFAC yes 35154564
chr1 213090536 213090541 ETS2 TRANSFAC yes 118455685
chr1 213090539 213090549 TBX21 JASPAR yes 35154565
chr1 213090539 213090549 TBX21 JASPAR yes 118455686
chr1 213090539 213090550 TBX20 JASPAR yes 35154566
chr1 213090539 213090550 TBX2 JASPAR yes 35154567
chr1 213090539 213090550 TBX20 JASPAR yes 118455687
chr1 213090539 213090550 TBX2 JASPAR yes 118455688
chr1 213090539 213090552 EOMES JASPAR yes 35154568
chr1 213090539 213090552 EOMES JASPAR yes 118455689
chr1 213090540 213090550 TBR1 JASPAR yes 35154569
chr1 213090540 213090550 TBR1 JASPAR yes 118455690
chr1 213090555 213090561 NFE2 TRANSFAC yes 35154570
chr1 213090555 213090561 NFE2 TRANSFAC yes 118455691
chr1 213090573 213090586 NFKB1 JASPAR yes 35154571
chr1 213090573 213090586 NFKB1 JASPAR yes 118455692
chr1 213090578 213090584 ZNF354C JASPAR yes 35154572
chr1 213090578 213090584 ZNF354C JASPAR yes 118455693
chr1 213090598 213090608 TEAD1 JASPAR yes 35154573
chr1 213090598 213090608 TEAD1 JASPAR yes 118455694
chr1 213090598 213090610 TEAD1 JASPAR yes 35154574
chr1 213090598 213090610 TEAD1 JASPAR yes 118455695
chr1 213090599 213090607 TEAD3 JASPAR yes 35154575
chr1 213090599 213090607 TEAD3 JASPAR yes 118455696
chr1 213090612 213090627 RUNX2 JASPAR yes 35154576
chr1 213090612 213090627 RUNX2 JASPAR yes 118455697
chr1 213090645 213090659 TCF7L2 JASPAR yes 35154577
chr1 213090645 213090659 TCF7L2 JASPAR yes 118455698
chr1 213090649 213090655 TCF4 TRANSFAC yes 35154578
chr1 213090649 213090655 TCF4 TRANSFAC yes 118455699
chr1 213090670 213090691 IRF1 JASPAR yes 35154579
chr1 213090670 213090691 IRF1 JASPAR yes 118455700
chr1 213090671 213090692 IRF1 JASPAR yes 35154580
chr1 213090671 213090692 IRF1 JASPAR yes 118455701
chr1 213090673 213090694 IRF1 JASPAR yes 35154581
chr1 213090673 213090694 IRF1 JASPAR yes 118455702
chr1 213090675 213090690 FOXP1 JASPAR yes 35154582
chr1 213090675 213090690 FOXP1 JASPAR yes 118455703
chr1 213090676 213090691 FOXP1 JASPAR yes 35154583
chr1 213090676 213090691 FOXP1 JASPAR yes 118455704
chr1 213090677 213090692 FOXP1 JASPAR yes 35154584
chr1 213090677 213090692 FOXP1 JASPAR yes 118455705
chr1 213090677 213090698 IRF1 JASPAR yes 35154585
chr1 213090677 213090698 IRF1 JASPAR yes 118455706
chr1 213090678 213090693 FOXP1 JASPAR yes 35154586
chr1 213090678 213090693 FOXP1 JASPAR yes 118455707
chr1 213090678 213090699 IRF1 JASPAR yes 35154587
chr1 213090678 213090699 ZNF263 JASPAR yes 35154588
chr1 213090678 213090699 IRF1 JASPAR yes 118455708
chr1 213090678 213090699 ZNF263 JASPAR yes 118455709
chr1 213090679 213090694 FOXP1 JASPAR yes 35154589
chr1 213090679 213090694 FOXP1 JASPAR yes 118455710
chr1 213090680 213090695 FOXP1 JASPAR yes 35154590
chr1 213090680 213090695 FOXP1 JASPAR yes 118455711
chr1 213090681 213090696 FOXP1 JASPAR yes 35154591
chr1 213090681 213090696 FOXP1 JASPAR yes 118455712
chr1 213090691 213090708 BCL6B JASPAR yes 35154592
chr1 213090691 213090708 BCL6B JASPAR yes 118455713
SNP sites on vista5038[chr1:213090277-213090696]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 213090287 rs1692181 C T
EGR1 SP1
926160
chr1 213090297 rs1692182 A C
EGR1 SP1
926161
chr1 213090318 rs115707072 C G
EGR1 SP1 ZNF263
926162
chr1 213090371 rs141782755 A C,G,T
SP1
926163
chr1 213090544 rs116170971 T A
EOMES SP1 TBR1 TBX2 TBX20 TBX21
926164
chr1 213090562 rs185621222 C G no 926165
chr1 213090628 rs139043750 GTTC G no 926166
Genes possibly regulated by vista5038[chr1:213090277-213090696]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 213003483 213020991 - C1orf227 ENSG00000185523.6 213020991 0.81 0.9 1833 30714
chr1 213031597 213072705 + FLVCR1 ENSG00000162769.8 213031597 0.79 1.0 1834 41320
chr1 213123862 213165379 + VASH2 ENSG00000143494.11 213123862 0.87 0.99 1835 66834
chr1 213165524 213189168 - ANGEL2 ENSG00000174606.8 213189168 0.63 0.99 1836 1528
Expression level of Genes
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miRNAs possibly regulated by vista5038[chr1:213090277-213090696]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results